New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1371732 = | 50 (0.850) | 5 (0.090) | 4/234 | NT | 9.7% | intergenic (+5/+67) | PP_1196/rimO | hypothetical protein/ribosomal protein S12 methylthiotransferase |
? | NC_002947 | 1371783 = | 47 (0.870) | intergenic (+56/+16) | PP_1196/rimO | hypothetical protein/ribosomal protein S12 methylthiotransferase |
TCGATGGCGACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1371890‑1371732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCT > NC_002947/1371783‑1371930 TCGATGGCGACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCG > 7:306647/1‑149 GACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCT > 2:282919/1‑149 ACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTT > 7:361591/1‑149 CCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTT > 5:2135/1‑149 CCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGC > 7:292213/1‑149 CCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCA > 5:45325/1‑149 CCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAA > 1:154388/1‑136 CCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAA < 2:154388/136‑1 TAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTGCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGT < 6:45325/149‑1 CTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAA < 4:50575/149‑1 TGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCT > 4:127913/1‑149 TCGATGGCGACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1371890‑1371732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCT > NC_002947/1371783‑1371930 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |