New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1371732 =	50 (0.850)	5 (0.090)	4/234	NT	9.7%	intergenic (+5/+67)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase
	?	NC_002947	1371783 =	47 (0.870)					intergenic (+56/+16)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase

CCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCT  >  NC_002947/1371635‑1371930                                                                                                                                                     |                                                                                                                                                    ccGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTg                                                                                                                                                     >  7:12032/1‑149 (MQ=255) ccGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTg                                                                                                                                                     <  7:198779/149‑1 (MQ=255)   gCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCa                                                                                                                                                   <  6:219039/149‑1 (MQ=255)    cAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAg                                                                                                                                                  <  7:348355/149‑1 (MQ=255)               acAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGt                                                                                                                                       >  4:176732/2‑149 (MQ=255)                cAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGtt                                                                                                                                      <  8:85431/149‑1 (MQ=255)                 aaCTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGttt                                                                                                                                     <  2:311405/149‑1 (MQ=255)                         gCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATggg                                                                                                                             >  6:2135/1‑149 (MQ=255)                          cAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGt                                                                                                                            >  2:271100/1‑149 (MQ=255)                                  ggCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGCTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCca                                                                                                                    >  4:227334/1‑149 (MQ=255)                                   gCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCTTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCcac                                                                                                                   <  2:47055/149‑1 (MQ=255)                                   gCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCcac                                                                                                                   <  6:357111/149‑1 (MQ=255)                                        tcGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTc                                                                                                              >  7:189587/1‑149 (MQ=255)                                         cGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCg                                                                                                             >  4:267535/1‑149 (MQ=255)                                           gATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTa                                                                                                           >  5:7245/1‑149 (MQ=255)                                                cAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCca                                                                                                                    <  2:311382/135‑1 (MQ=255)                                                cAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCca                                                                                                                    >  1:311382/1‑135 (MQ=255)                                                cAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACtcgt                                                                                                      <  1:367983/149‑1 (MQ=255)                                                 aGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACtcgtc                                                                                                     >  1:357156/1‑149 (MQ=255)                                                  gCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACtcgtcg                                                                                                    <  6:7245/149‑1 (MQ=255)                                                   cccGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCgg                                                                                                   >  8:306647/1‑149 (MQ=255)                                                        aTGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATcc                                                                                              <  3:267535/149‑1 (MQ=255)                                                           ccGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATccac                                                                                            <  8:12032/148‑1 (MQ=255)                                                            cGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATccacaa                                                                                          >  2:146610/1‑147 (MQ=255)                                                                    gcCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCaa                                                                                  <  2:107964/149‑1 (MQ=255)                                                                       tGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACg                                                                                >  5:205651/1‑148 (MQ=255)                                                                           gCTGTTTCACACGTTCTGACAGAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACtt                                                                           >  1:282919/1‑149 (MQ=255)                                                                           gCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGTGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACt                                                                            <  3:227334/148‑1 (MQ=255)                                                                                   acacGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCt                                                                   >  3:50575/1‑149 (MQ=255)                                                                                    cacGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTg                                                                  <  1:271100/149‑1 (MQ=255)                                                                                        ttCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCtt                                                              >  4:241257/1‑149 (MQ=255)                                                                                             aCAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCt                                                               <  6:215819/143‑1 (MQ=255)                                                                                             aCAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCt                                                               >  5:215819/1‑143 (MQ=255)                                                                                               aaaaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCa                                                       <  2:357156/149‑1 (MQ=255)                                                                                               aaaaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCa                                                       >  5:25496/1‑149 (MQ=255)                                                                                               aaaaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCa                                                       >  8:361591/1‑149 (MQ=255)                                                                                                aaaaaTCCCCTGCGGCGGTCATTCCCTATGTAGAAGTCCGGGGCAGGTGCTTTGCAGGCTTCAGCCGTTTTATATGCGTTCAGCACACATGTCGTAGTCGTCGGCATCAACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCAt                                                      <  1:146610/149‑1 (MQ=255)                                                                                                  AAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATgg                                                    >  5:2135‑M1/1‑149 (MQ=255)                                                                                                   AAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGt                                                   >  7:361591‑M1/1‑149 (MQ=255)                                                                                                    AGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTc                                                  >  2:282919‑M1/1‑149 (MQ=255)                                                                                                      cccctgccccggcgttctccatagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGc                                                >  7:292213‑M2/48‑149 (MQ=255)                                                                                                        cctgccccggcgttctccatagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGaa                                                           >  1:154388‑M2/46‑136 (MQ=255)                                                                                                        cctgccccggcgttctccatagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGaa                                                           <  2:154388‑M2/91‑1 (MQ=255)                                                                                                        cctgccccggcgttctccatagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCa                                              >  5:45325‑M2/46‑149 (MQ=255)                                                                                                            CGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGa                                          >  7:306647‑M1/1‑149 (MQ=255)                                                                                                             gcCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGa                                          <  6:205651/148‑1 (MQ=255)                                                                                                               cGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATg                                        >  8:12202/1‑148 (MQ=255)                                                                                                                ggTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGaa                                      <  7:12202/149‑1 (MQ=255)                                                                                                                 gTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATg                                        >  8:175951/1‑146 (MQ=255)                                                                                                                 gTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATg                                        <  7:175951/146‑1 (MQ=255)                                                                                                                 gTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGaa                                      >  5:39991/1‑148 (MQ=255)                                                                                                                 gTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAac                                     <  8:189587/149‑1 (MQ=255)                                                                                                                     ttCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGc                                 >  3:72160/1‑149 (MQ=255)                                                                                                                           tagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTGCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGt                           <  6:45325‑M2/123‑1 (MQ=255)                                                                                                                             ggAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCg                                           <  4:153648/131‑1 (MQ=255)                                                                                                                             ggAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCg                                           >  3:153648/1‑131 (MQ=255)                                                                                                                              gagaAGGCCGGGGCAGTGGCTTTGCAGGCTTCAGCCGTTTTAGATGGCTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGt                           <  4:4181/146‑1 (MQ=255)                                                                                                                              gagaACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGt                           >  3:4181/1‑146 (MQ=255)                                                                                                                              gagaACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGa                        >  1:30220/1‑149 (MQ=255)                                                                                                                                    gCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCg                  >  4:209321/1‑149 (MQ=255)                                                                                                                                       ggggCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTg               <  6:25496/149‑1 (MQ=255)                                                                                                                                        gggCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTg               >  5:216039/1‑148 (MQ=255)                                                                                                                                                 ctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCgaagaa     <  4:50575‑M2/145‑1 (MQ=255)                                                                                                                                                    tGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCt  >  4:127913‑M2/2‑149 (MQ=255)                                                                                                                                                     gCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCt  <  3:127913/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCT  >  NC_002947/1371635‑1371930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.