New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1458470	56 (0.950)	3 (0.050)	3/238	NT	5.7%	coding (1128/1458 nt)	algA	mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
	?	NC_002947	= 1458516	48 (0.870)					coding (1082/1458 nt)	algA	mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase

ATGTAGGTCGACTGGTTTTCGGTCAGCAAGAACACGTTCTCGTCGCAGGTCACCTCGGCGGTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1458315‑1458470 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctggaagTGTATCGCCCGTGGGGCTCGTACGACTCGGTGGACATGGGCGGCCGCTTCCAGGTCAAGCACATCACCGTCAAGCCGGGCGCCAGCCTCTCGCTGCAGATGCACCACCACCGCGCCGAACACTGGATCGTGGTATCCGGTACCGCCGA  <  NC_002947/1458516‑1458369                                                                                                                                                                                                                                                                                                                  ATGTAGGTCGACTGGTTTTCGGTCAGCAAGAACACGTTCTCGTCGCAGGTCACCTCGGCGGTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGAC                                                                                                                                                             <  3:184574/149‑1     AGGTCGACTGGTTTTCGGTCAGCAAGAACACGTTCTCGTCGCAGGTCACCTCGGCGGTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTG                                                                                                                                                          >  6:318555/1‑148        TCGACTGGTTTTCGGTCAGCAAGAACACGTTCTCGTCGCAGGTCACCTCGGCGGTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAG                                                                                                                                                      <  1:160850/149‑1                                        TCGTCGCAGGTCACCTCGGCGGTACCGGATACCACGATCCAGTGATCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGTGTATCGCCCGTGGGGCTCGTACGACTCGGTG                                                                                                                      >  1:78994/1‑149                                                                CCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGTGTATCGCCCGTGGGGCTCGTACGACTCGGTGGACATGGGCGGCCGCTTCCAGGT                                                                                               <  2:78994/148‑1                                                                   GATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGTGTATCGCCCGTGGGGCTCGTACGACTCGGTGGACATGGGCGGCCGCTTCCAGGTCAAG                                                                                           <  8:54528/149‑1                                                                      ACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGAC                                                                                                                                                             <  7:128921/80‑1                                                                      ACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGAC                                                                                                                                                             >  8:128921/1‑80                                                                                                                                                      CTGGAAGTGTATCGCCCGTGGGGCTCTTACGACTCTGTTGACATGGGCGGCAGCTTCCATGTCAAGCACATCACCTTCAAGACTGGCGCCAGCCTCTCGCTGCAGATGCACCACCACCGCGCCGAACACTGGATCGTTGTATCCGGTAC        <  6:118981/149‑1                                                                                                                                                        GGAAGTGTATCGCCCGTGGGGCTCGTACGACTCGGTGGACATGGGCGGCCGCTTCCAGGTCAAGCACATCACCGTCAAGCCGGGCGCCAGCCTCTCGCTGCAGATGCACCACCACCGCGCCGAACACTGGATCGTGGTATCCGGTACCG      >  5:224274/1‑149                                                                                                                                                          AAGTGTATCGCCCGTGGTGGTCGTACGACTCGGTGGACATGGGCGGCCGCTTCCAGGTCAAGCACATCACCGTCAAGCCGGGCGCCAGCCTCTCGCTGCAGATGCACCACCACCGCGCCGAACACTGGATCGTGGTATCCGGTACCGCC    <  6:204063/149‑1                                                                                                                                                            GTGTATCGCCCGTGGGGCTCGTACGACTCGGTGGACATGGGCGGCCGCTTCCAGGTCAAGCACATCACCGTCAAGCCGGGCGCCAGCCTCTCGCTGCAGATGCACCACCACCGCGCCGAACACTGGATCGTGGTATCCGGTACCGCCGA  <  5:148234/149‑1                                                                                                                                                                                                                                                                                                                  ATGTAGGTCGACTGGTTTTCGGTCAGCAAGAACACGTTCTCGTCGCAGGTCACCTCGGCGGTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1458315‑1458470 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctggaagTGTATCGCCCGTGGGGCTCGTACGACTCGGTGGACATGGGCGGCCGCTTCCAGGTCAAGCACATCACCGTCAAGCCGGGCGCCAGCCTCTCGCTGCAGATGCACCACCACCGCGCCGAACACTGGATCGTGGTATCCGGTACCGCCGA  <  NC_002947/1458516‑1458369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.