New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1458470	56 (0.950)	3 (0.050)	3/238	NT	5.7%	coding (1128/1458 nt)	algA	mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
	?	NC_002947	= 1458516	48 (0.870)					coding (1082/1458 nt)	algA	mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase

TCGGCGGTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGACCACCACGATGTTCTCCAGGCCGATCACCGA  >  NC_002947/1458369‑1458661                                                                                                                                                    |                                                                                                                                                  tCGGCGGTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACAc                                                                                                                                                  <  5:148234‑M2/149‑2 (MQ=255)   ggcggTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGACCACCACGGGCGATACActt                                                                                                                                                <  6:204063‑M2/149‑4 (MQ=255)     cggTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACActtcc                                                                                                                                              >  5:224274‑M2/1‑144 (MQ=255)       gTACCGGATACAACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCAGTCTTGAAGGTGATGTGCTTGACATGGAAGCTGCCGCCCATGTCAACAGAGTCGTAAGAGCCCCACGGGCGATACActtccag                                                                                                                                            <  6:118981‑M2/149‑8 (MQ=255)           cGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAggtgg                                                                                                                                        <  1:315048/149‑1 (MQ=255)                 ccACGATCCAGTGTTCGGCGCTGTGGTTGTGCATCTGCAGCGAGAGGCTGGCGCCCGTCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTTCGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTg                                                                                                                                   <  5:118981/148‑1 (MQ=255)                 ccACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTgg                                                                                                                                  <  8:155746/149‑1 (MQ=255)                 ccACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTgg                                                                                                                                  <  7:28379/149‑1 (MQ=255)                  cACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTggg                                                                                                                                 >  5:126816/1‑149 (MQ=255)                  cACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTggg                                                                                                                                 >  3:343001/1‑149 (MQ=255)                  cACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACATGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTggg                                                                                                                                 >  5:238035/1‑149 (MQ=255)                          aGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTg                                                                                                                         <  6:150936/149‑1 (MQ=255)                          aGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTg                                                                                                                         >  5:150936/1‑149 (MQ=255)                                 ggCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCGCGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCt                                                                                                                  >  8:72826/1‑149 (MQ=255)                                     cgGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTtc                                                                                                              <  3:146399/149‑1 (MQ=255)                                      ggtggtggaGCATCTGCAGCGAGATGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACGTGGAAGCTGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACTGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTtcg                                                                                                             <  2:52349/149‑1 (MQ=255)                                          gtggtgCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTtcgtc                                                                                                           >  4:312231/1‑147 (MQ=255)                                            ggtgCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAgg                                                                                                       <  5:116157/149‑1 (MQ=255)                                               gCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAgg                                                                                                       <  8:320727/146‑1 (MQ=255)                                               gCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAgg                                                                                                       >  7:320727/1‑146 (MQ=255)                                                    tGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGAc                                                                                               >  6:35844/1‑149 (MQ=255)                                                        gCGTGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAATCGGCCGCCCTTGTCCACCGAGTCGTACGAGCGCCTCGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATc                                                                                           <  6:260444/149‑1 (MQ=255)                                                           agagGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGc                                                                                        <  4:343001/149‑1 (MQ=255)                                                            gagGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGt                                                                                                                          >  4:292413/1‑114 (MQ=255)                                                            gagGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGt                                                                                                                          <  3:292413/114‑1 (MQ=255)                                                            gagGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTAGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCt                                                                                       <  1:94124/149‑1 (MQ=255)                                                              ggCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTg                                                                                     <  3:312231/149‑1 (MQ=255)                                                                   gcgcCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGcc                                                                                <  6:238035/149‑1 (MQ=255)                                                                     gcCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCt                                                                              >  1:148859/1‑149 (MQ=255)                                                                      cccGGCTTGTCGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGATTCGTACGAGCCGCACTGGCGATACACTTCCAGGTGGTTCTGGGTTTCCTTGCGGCCCTGTTCGTCGAGTGTCTTGACCATCTGCTTGACGCCCTg                                                                             <  5:204063/149‑1 (MQ=255)                                                                              gACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGAcctt                                                                       <  6:148234/147‑1 (MQ=255)                                                                               aCGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTc                                                                                                                             <  8:11598/92‑1 (MQ=255)                                                                               aCGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTc                                                                                                                             >  7:11598/1‑92 (MQ=255)                                                                                  gggATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCCCGGAGTCGTACGAGCCCCCCGGGCGATACACTTCCAGGTGGGTCTGGGGTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACGATCTGCTTGACGCCCTGGAccttgtcctt                                                                 <  8:173044/147‑1 (MQ=255)                                                                                  gTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGAccttgtcctt                                                                 >  6:391342/1‑149 (MQ=255)                                                                                        tgCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTggg                                                            <  5:35844/148‑1 (MQ=255)                                                                                        tgCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTggg                                                            <  2:55472/148‑1 (MQ=255)                                                                                          cTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACActtccaggtcaagcacatcaccgtcaagccgggcgccagcctctcgctgcagatgcaccaccaccgcgccgaacactggatcgtggtatc                                                         <  8:54528‑M2/149‑91 (MQ=255)                                                                                             gACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAatc                                                       >  6:293844/1‑148 (MQ=255)                                                                                              aCCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACActtccaggtcaagcacatcaccgtcaagccgggcgccagcctctcgctgcagatgcaccaccaccgcgccgaacactggatcgtggtatccgg                                                      <  2:78994‑M2/148‑94 (MQ=255)                                                                                                cTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGAccttgtccttgt                                                               <  1:235180/137‑1 (MQ=255)                                                                                                cTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGAccttgtccttgt                                                               >  2:235180/1‑137 (MQ=255)                                                                                                  ggAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGAccttgtcc                                                                   >  2:283959/1‑131 (MQ=255)                                                                                                  ggAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGAccttgtcc                                                                   <  1:283959/131‑1 (MQ=255)                                                                                                  ggAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCAGTGCGGCACTGTTCGTCGAGGGTCTTGACCATCAGCTTGACCCCCTGGACCTTGTCCTTGTGGGCAAacatcaac                                                 >  2:365785/1‑147 (MQ=255)                                                                                                  ggAAGCGGCCGCCCATGTCCACCGAGGCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTCGTCCTTGTGGGCAATCATCATg                                                 <  7:57513/149‑1 (MQ=255)                                                                                                      gCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCAt                                             >  8:200183/1‑149 (MQ=255)                                                                                                                    ccACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGac                                >  7:22901/1‑148 (MQ=255)                                                                                                                     cACCGAGTCGTACGAGCCCCACGGGCGATACActtccaggtcaagcacatcaccgtcaagccgggcgccagcctctcgctgcagatgcaccaccaccgcgccgatcactggatcgtggtatccggtaccgccgaggtgacctgcgacga                              >  1:78994‑M2/1‑32 (MQ=255)                                                                                                                      aCCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATg                                                 >  8:102912/1‑129 (MQ=255)                                                                                                                      aCCGAGTCCTACGAGCCACACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCACTGTTAGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCGTCCTTGGTCTCgacgac                             >  4:36588/1‑149 (MQ=255)                                                                                                                        cGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGAccacca                           <  7:72826/149‑1 (MQ=255)                                                                                                                        cGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGAccacca                           <  7:200183/149‑1 (MQ=255)                                                                                                                         gAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGGTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGACcaccac                          <  5:391342/149‑1 (MQ=255)                                                                                                                                       ccACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGACCACCACGATGTTCTCCAGGc            <  5:293844/149‑1 (MQ=255)                                                                                                                                           gggCGATACACTTCCAGGTTGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGACCACCTCGATGTTCTCCAGGCCGAt        >  2:213036/1‑149 (MQ=255)                                                                                                                                                  acacTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGACCACCACGATGTTCTCCAGGCCGATCACCGa  >  7:33850/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TCGGCGGTACCGGATACCACGATCCAGTGTTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCTGGCGCCCGGCTTGACGGTGATGTGCTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTACGAGCCCCACGGGCGATACACTTCCAGGTGGTTCTGGGTTTCCGTGCGGCCCTGTTCGTCGAGGGTCTTGACCATCTGCTTGACGCCCTGGACCTTGTCCTTGTGGGCAATCATCATGGCATCCTTGGTCTCGACCACCACGATGTTCTCCAGGCCGATCACCGA  >  NC_002947/1458369‑1458661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.