| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1614536 = | 40 (0.680) | 4 (0.070) | 4/244 | NT | 10.2% | coding (70/1683 nt) | ushA | 5'‑nucleotidase/2',3'‑cyclic phosphodiesterase |
| ? | NC_002947 | 1614568 = | 32 (0.570) | coding (38/1683 nt) | ushA | 5'‑nucleotidase/2',3'‑cyclic phosphodiesterase | |||||
CCAATGCCCGGGTGAATAGAGTCGGATTGCTGCCCTGATCGCCAGCAAACCCACACTTCCCGGCATTCAAGAGGTAATGATGAAAGTTCGTCTTTCTTGCAACTATCGCTCGGCTATTGCCTGGGCATGCCTTGCCATCAGCGCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1614684‑1614536‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcaATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTGGTAACTATCTATCTTCAGG > NC_002947/1614568‑1614710 CCAATGCCCGGGTGAATAGAGTCGGATTGCTGCCCTGATCGCCAGCAAACCCACACTTCCCGGCATTCAAGAGGTAATGATGAAAGTTCGTCTTTCTTGCAACTATCGCTCGGCTATTGCCTGGGCATGCCTTGCCATCAGCGCAGGCA < 2:38944/149‑1CCAATGCCCGGGTGAATAGAGTCGGATTGCTGCCCTGATCGCCAGCAAACCCACACTTCCCGGCATTCAAGACGTAATGATGAAAGTTCGACTTTCTTGCAACTATCGCTCGGCTATTGCCTGTGCATGCCTTGCCATCAGAGCAGGCA > 3:51061/1‑149 TCGGCTATTGCCTGGGCATGCCTTGCCATCAGCGCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCAC > 5:173023/1‑146 TCGGCTATTGCCTGGGCATGCCTTGCCATCAGCGCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCAC < 6:173023/146‑1 CTGGGCATGCCTTGCCATCAGCGCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGTGTTTGCTGGC < 8:229175/106‑1 CTGGGCATGCCTTGCCATCAGCGCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGC > 7:229175/1‑106 CAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTGGTAACTATCTATCTTCAGG < 8:129252/149‑1 CCAATGCCCGGGTGAATAGAGTCGGATTGCTGCCCTGATCGCCAGCAAACCCACACTTCCCGGCATTCAAGAGGTAATGATGAAAGTTCGTCTTTCTTGCAACTATCGCTCGGCTATTGCCTGGGCATGCCTTGCCATCAGCGCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1614684‑1614536‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcaATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTGGTAACTATCTATCTTCAGG > NC_002947/1614568‑1614710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |