New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1614536 =	40 (0.680)	4 (0.070)	4/244	NT	10.2%	coding (70/1683 nt)	ushA	5'‑nucleotidase/2',3'‑cyclic phosphodiesterase
	?	NC_002947	1614568 =	32 (0.570)					coding (38/1683 nt)	ushA	5'‑nucleotidase/2',3'‑cyclic phosphodiesterase

GCGGGTAGCGCCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTGGTAACTATCTATCTTCAGG  >  NC_002947/1614420‑1614710                                                                                                                                                     |                                                                                                                                               gCGGGTAGCGCCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCaa                                                                                                                                                >  3:197556/1‑149 (MQ=255) gCGGGTAGCGCCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCaa                                                                                                                                                <  3:299550/149‑1 (MQ=255)     gTAGCGCCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGc                                                                                                                                            <  7:282941/149‑1 (MQ=255)         cgcCTTGCGCGCCAGCGTAGTCCTTGGGGTTGGGTACCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAg                                                                                                                                        <  7:286070/149‑1 (MQ=255)         cgcCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAg                                                                                                                                        <  5:72320/149‑1 (MQ=255)           gtgaatagagtcggattgctgccctgatcgccagcaaacccacacttcccggcattcaagaggtaatgatgaaagttcgtctttcttgcaactatcgctcggctatTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGa                                                                                                                                         <  6:173023‑M1/40‑1 (MQ=255)           gtgaatagagtcggattgctgccctgatcgccagcaaacccacacttcccggcattcaagaggtaatgatgaaagttcgtctttcttgcaactatcgctcggctatTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGa                                                                                                                                         >  5:173023‑M1/107‑146 (MQ=255)                            gTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGAc                                                                                                                     >  6:112957/1‑149 (MQ=255)                             tCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATGATTGATAGCCACGACGTTGAGCTGGACGGGGGCGGGGGACTCTGCGGCAGGGCTGCCTGCGCTGAGGGCAAGGCATGCGCAGGCAATAGCCGAGCGATAGTTGCAAGAacgacg                                                                                                                    >  2:288569/1‑149 (MQ=255)                             tCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGAc                                                                                                                     >  8:56876/1‑148 (MQ=255)                               cTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGaa                                                                                                                  >  5:68768/1‑149 (MQ=255)                                    ggttgggttCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCT‑CGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTtca                                                                                                            >  2:355575/1‑149 (MQ=255)                                          gttCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGcc                                                                                                                                           <  5:351205/113‑1 (MQ=255)                                          gttCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGcc                                                                                                                                           >  6:351205/1‑113 (MQ=255)                                                    gCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTtcatc                                                                                                          <  7:4894/136‑1 (MQ=255)                                                      cGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAg                                                                                                                                             >  8:337267/1‑99 (MQ=255)                                                      cGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAg                                                                                                                                             <  7:337267/99‑1 (MQ=255)                                                      cGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTAGCTCTTGAATg                                                                                           <  6:68768/149‑1 (MQ=255)                                                      cGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATg                                                                                           >  8:30156/1‑149 (MQ=255)                                                          gataTCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCg                                                                                        <  8:161790/145‑1 (MQ=255)                                                          gagaTCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCgg                                                                                       <  5:112957/149‑1 (MQ=255)                                                          gagaTCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCg                                                                                        <  1:317794/148‑1 (MQ=255)                                                                   gATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGtgtg                                                                               <  7:30156/148‑1 (MQ=255)                                                                   gATAGCAACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTAGAATGCCGCGAAGTGTgg                                                                              >  4:51061/1‑149 (MQ=255)                                                                     tAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAgt                                                                                  <  5:224365/143‑1 (MQ=255)                                                                     tAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAgt                                                                                  >  6:224365/1‑143 (MQ=255)                                                                            gacgTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTgg                                                                     <  7:56876/149‑1 (MQ=255)                                                                              cgTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGc                                                                    >  5:153395/1‑148 (MQ=255)                                                                                ttGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGAt                                                                 >  6:205975/1‑149 (MQ=255)                                                                                         aCGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGGAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGgcag                                                         <  3:343853/148‑1 (MQ=255)                                                                                                        tctGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTAtt                                          >  6:303008/1‑148 (MQ=255)                                                                                                            cGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCAGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCAacc                                     >  7:129252/1‑149 (MQ=255)                                                                                                             tcggctattgcctgggcatgccttgccatcagcgcaggcaATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCAc                                       <  6:173023‑M2/106‑1 (MQ=255)                                                                                                             tcggctattgcctgggcatgccttgccatcagcgcaggcaATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCAc                                       >  5:173023‑M2/41‑146 (MQ=255)                                                                                                                     TGCCTGCTCTGATGGCAAGGCATGCACAGGCAATAGCCGAGCGATAGTTGCAAGAAAGTCGAACTTTCATCATTACGTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTgg                            >  3:51061‑M1/1‑149 (MQ=255)                                                                                                                     TGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTgg                            <  2:38944‑M1/149‑1 (MQ=255)                                                                                                                        ctgggcatgccttgccatcagcgcaggcaATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGTGTTTGCTGGc                                                                    <  8:229175‑M2/77‑1 (MQ=255)                                                                                                                        ctgggcatgccttgccatcagcgcaggcaATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGc                                                                    >  7:229175‑M2/30‑106 (MQ=255)                                                                                                                            gcTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTg                     <  5:205975/149‑1 (MQ=255)                                                                                                                             cTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGaa                                                                                                                  <  6:21005/55‑1 (MQ=255)                                                                                                                                   gCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTGGTAActa              >  7:51106/1‑149 (MQ=255)                                                                                                                                     aaGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATcc                                                   >  4:217913/1‑110 (MQ=255)                                                                                                                                     aaGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATcc                                                   <  3:217913/110‑1 (MQ=255)                                                                                                                                     aaGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTAt                                           >  5:67676/1‑118 (MQ=255)                                                                                                                                     aaGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTAt                                           <  6:67676/118‑1 (MQ=255)                                                                                                                                             cccAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTGGTAACTATCTATCTTCa    <  8:51106/149‑1 (MQ=255)                                                                                                                                               caggcaATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTGGTAACTATCTATCTTCAgg  <  8:129252‑M2/143‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                               GCGGGTAGCGCCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCTGCGGCAAGGCTGCCTGCGCTGATGGCAAGGCATGCCCAGGCAATAGCCGAGCGATAGTTGCAAGAAAGACGAACTTTCATCATTACCTCTTGAATGCCGGGAAGTGTGGGTTTGCTGGCGATCAGGGCAGCAATCCGACTCTATTCACCCGGGCATTGGGCAAGTGGTAACTATCTATCTTCAGG  >  NC_002947/1614420‑1614710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.