| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1617138 | 74 (1.250) | 4 (0.070) | 4/240 | NT | 5.7% | coding (121/1515 nt) | PP_1416 | tricarboxylate transport protein TctA |
| ? | NC_002947 | = 1617169 | 63 (1.140) | coding (90/1515 nt) | PP_1416 | tricarboxylate transport protein TctA | |||||
GGTCGAGGCTTCGCCCGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1616983‑1617138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgatcggCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAACGGCGTGGCCCTGCTGATCCCCATCGCCTTTGCCCTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCGCAGTGTACCTGGGCTGCGAATATGGCGGGCGTATC < NC_002947/1617169‑1617022 GGTCGAGGCTTCGCCCGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGT > 2:107966/1‑149GGTCGAGGCTTCGCCCGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGT > 3:105417/1‑149GGTCGAGGCTTCGCCCGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGT < 7:251246/149‑1 TCGAGGCTTAGCCCGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCAATATTAGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGTCGGCAGGCCGAGGGCAAAGGCGATCGGGATCAGCAGGGCCACGCCGTT > 5:354581/1‑148 GATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAAGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGCACCGTGGTCGGCCTGCTACCGG > 3:324967/1‑149 GCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAAGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAACG < 4:324967/149‑1 CATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAA > 3:50081/1‑145 CATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAA < 4:50081/145‑1 TCGGCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAACGGCGTGGCCCTGCTGATCCCCATCGCCTTTGCCCTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCGCAGTGTACCTGGGCTGCGAATATGGCGGGCG > 4:116871/1‑148 GCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAACGGCGTGGCCCTGCTGATCCCCATCGCCTTTGCCCTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCGCAGTGTACCTGGGCTGCGAATATGGCGGGCGTATC < 3:359024/149‑1 GGTCGAGGCTTCGCCCGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1616983‑1617138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgatcggCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAACGGCGTGGCCCTGCTGATCCCCATCGCCTTTGCCCTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCGCAGTGTACCTGGGCTGCGAATATGGCGGGCGTATC < NC_002947/1617169‑1617022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |