New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 161713874 (1.250)4 (0.070) 4/240 NT 5.7% coding (121/1515 nt) PP_1416 tricarboxylate transport protein TctA
?NC_002947 = 1617169 63 (1.140)coding (90/1515 nt) PP_1416 tricarboxylate transport protein TctA

TTCGCCCGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTTCTCCAGTACGCTCAGCAGGCC  >  NC_002947/1616992‑1617286
                                                                                                                                                   |                                                                                                                                                      
ttCGCCCGGGATGTTCAGAAGGATCGAGCTTATACGCCCGCCATATTCGCATCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCTGCGGAAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGc                                                                                                                                                      <  6:354581/149‑1 (MQ=255)
    cccGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAg                                                                                                                                                  >  3:244914/1‑149 (MQ=255)
        ggATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGccc                                                                                                                                              >  4:303029/1‑149 (MQ=255)
              tCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAg                                                                                                                                         <  4:244914/148‑1 (MQ=255)
                agcagGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTTCGGCCAGCAGTATCAGCGCCTATTCCGGCTGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCGACGCCGTTGATCGGGCCCAGGCCCGGTAGCa                                                                                                                                       <  1:232992/149‑1 (MQ=255)
                agcagGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCTGGGCCCgatcaacg                                                                                                                                      <  6:91523/149‑8 (MQ=255)
                 gcagGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAgg                                                                                                                                     >  7:147690/1‑149 (MQ=255)
                     gATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGa                                                                                                                                 >  1:209317/1‑149 (MQ=255)
                     gATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGa                                                                                                                                 >  5:184534/1‑149 (MQ=255)
                     gATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCAGTAGCAGGCCGa                                                                                                                                 <  4:105417/149‑1 (MQ=255)
                     gATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAAGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGcaccgtggtcggcctgctaccgg                                                                                                                                 >  3:324967‑M1/1‑126 (MQ=255)
                        cGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCa                                                                                                                              >  2:173170/1‑149 (MQ=255)
                          cgctgctACGGCTGCCTTATTCGCACCCCAGGGAGACTGCGGGCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGAGCCGCAGGGCGACGCCGTTGATCGGGCCCAGGCCCGGTAGGAGGCCGACCAct                                                                                                                            <  8:172852/148‑2 (MQ=255)
                          aGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACg                                                                                                                           >  3:157418/1‑149 (MQ=255)
                              gATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGc                                                                                                                       <  3:359024‑M2/149‑2 (MQ=255)
                                  cgcccgccATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGccga                                                                                                                    >  4:116871‑M2/1‑144 (MQ=255)
                                      cgccATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAg                                                                                                               <  1:177173/149‑1 (MQ=255)
                                      cgccATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGCGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAg                                                                                                               >  3:318061/1‑149 (MQ=255)
                                       gccATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAAGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGcaccgtggtcggcctgctaccgggcctgggcccgatcaacg                                                                                                               <  4:324967‑M1/149‑42 (MQ=255)
                                        ccATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGt                                                                                                             <  4:140101/149‑1 (MQ=255)
                                         cATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGcaccgtggtcggcctgctaccgggcctgggcccgatcaa                                                                                                                 >  3:50081‑M1/1‑106 (MQ=255)
                                         cATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGcaccgtggtcggcctgctaccgggcctgggcccgatcaa                                                                                                                 <  4:50081‑M1/145‑40 (MQ=255)
                                          atatTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGc                                                                                                           >  4:161886/1‑149 (MQ=255)
                                              tCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGc                                                                                                                                                >  7:205637/1‑109 (MQ=255)
                                              tCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGc                                                                                                                                                <  8:205637/109‑1 (MQ=255)
                                                gCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGAc                                                                                                                                >  5:191971/1‑123 (MQ=255)
                                                gCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGAc                                                                                                                                <  6:191971/123‑1 (MQ=255)
                                                     ccAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCg                                                                                                <  8:25449/149‑1 (MQ=255)
                                                      cAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCgg                                                                                               >  3:196614/1‑149 (MQ=255)
                                                       aGGTACACTCCGGACAGCAGGATCAGCTCCTATTCGGGCTGCAGGCCGAGGGCTAAGGCGATGGGGATCATGAGGGCCACGACGTTGATCGGGCCCAGGCCCTGTAGCAGGCCGACGACGGTGCCGATCAAGGTGCCGGAGAGGGCTGt                                                                                              <  6:191800/149‑1 (MQ=255)
                                                       aGGGACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGt                                                                                              <  6:270397/149‑1 (MQ=255)
                                                         gTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGa                                                                                            >  4:276856/1‑149 (MQ=255)
                                                             acTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAg                                                                                        <  4:196614/149‑1 (MQ=255)
                                                              cTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAgg                                                                                       <  1:173170/149‑1 (MQ=255)
                                                              cTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAgg                                                                                       <  2:31991/149‑1 (MQ=255)
                                                               tGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGt                                                                                      >  1:58878/1‑149 (MQ=255)
                                                                 cGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGtt                                                                                     <  4:157418/148‑1 (MQ=255)
                                                                  ggCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTTCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGt                                                                                   <  3:303029/149‑1 (MQ=255)
                                                                    ccAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAg                                                                                 <  4:318061/149‑1 (MQ=255)
                                                                        cagGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAgggg                                                                             >  6:85890/1‑148 (MQ=255)
                                                                        cagGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAgggg                                                                             <  5:85890/148‑1 (MQ=255)
                                                                          ggATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGAc                                                                          <  2:58878/149‑1 (MQ=255)
                                                                              cAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAggg                                                                      >  7:337328/1‑149 (MQ=255)
                                                                                 cgcCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAAGGCaa                                                                   >  4:52421/1‑149 (MQ=255)
                                                                                  gcCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTg                                                                                             <  3:276492/123‑1 (MQ=255)
                                                                                  gcCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTg                                                                                             >  4:276492/1‑123 (MQ=255)
                                                                                   ccGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAggggg                                                                            >  3:340800/1‑138 (MQ=255)
                                                                                   ccGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAggggg                                                                            <  4:340800/138‑1 (MQ=255)
                                                                                    cGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGc                                                                >  7:9796/1‑149 (MQ=255)
                                                                                      aTTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGcc                                                               >  8:230304/1‑148 (MQ=255)
                                                                                             cggcAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCt                                                       <  8:147690/149‑1 (MQ=255)
                                                                                                   gCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCa                                                 <  6:184534/149‑1 (MQ=255)
                                                                                                    ccGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAg                                                >  2:252398/1‑149 (MQ=255)
                                                                                                     cGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAAGGCAATGCCGAAGCCCTGGCCCAgg                                               <  3:52421/149‑1 (MQ=255)
                                                                                                         ggCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGc                                           <  4:359024/149‑1 (MQ=255)
                                                                                                            aaaGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTc                                         >  4:88952/1‑148 (MQ=255)
                                                                                                             aaGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAggg                                                                      <  7:292889/118‑1 (MQ=255)
                                                                                                             aaGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAggg                                                                      >  8:292889/1‑118 (MQ=255)
                                                                                                             aaGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCaa                                       <  7:230304/149‑1 (MQ=255)
                                                                                                                  gATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTAt                                  >  5:359742/1‑149 (MQ=255)
                                                                                                                  gATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTAt                                  >  1:156889/1‑149 (MQ=255)
                                                                                                                          tCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCa                          <  3:161886/149‑1 (MQ=255)
                                                                                                                          tCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCa                          <  2:209317/149‑1 (MQ=255)
                                                                                                                              cagGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCATGGTGCCGGAGAGGGCGGTGACCAGGTTGTAgg                                                                               <  1:357475/92‑1 (MQ=255)
                                                                                                                              cagGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAGGGTGCCGGAGAGGGCGGTGACCAGGTTGTAgg                                                                               >  2:357475/1‑92 (MQ=255)
                                                                                                                              cagGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAgg                                               >  2:190272/1‑124 (MQ=255)
                                                                                                                              cagGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAgg                                               <  1:190272/124‑1 (MQ=255)
                                                                                                                                 ggCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTtctc                    >  1:142307/1‑148 (MQ=255)
                                                                                                                                   ccACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGTGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTTCTCCa                  <  1:107966/149‑1 (MQ=255)
                                                                                                                                   ccACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGaa                                                            <  5:87042/106‑1 (MQ=255)
                                                                                                                                   ccACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGaa                                                            >  6:87042/1‑106 (MQ=255)
                                                                                                                                   ccACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTTCTCCAg                 <  7:59474/149‑1 (MQ=255)
                                                                                                                                   ccACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGCGCAATGCCGAAGCCCTGGACCAGGTACCTc                                         >  2:13424/1‑125 (MQ=255)
                                                                                                                                    cACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGt                                                                                   >  2:34426/1‑83 (MQ=255)
                                                                                                                                    cACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTTCTCCAGt                <  8:9796/149‑1 (MQ=255)
                                                                                                                                       cGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGTAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATcc                                >  4:369606/1‑131 (MQ=255)
                                                                                                                                       cGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGTAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATcc                                <  3:369606/131‑1 (MQ=255)
                                                                                                                                          cGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGccgatcaacggcgtggccctgctgatccccatcgcctttgccctcggcttgccgccggaatcggcgctgatcctgctggccgcagtgtacctgggctgcgaatatggc            <  4:324967‑M2/149‑109 (MQ=255)
                                                                                                                                           tgctaccGGGCCTGGGCCCGATAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCa                               >  3:73042/7‑128 (MQ=255)
                                                                                                                                           tgctaccGGGCCTGGGCCCGATAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCa                               <  4:73042/122‑1 (MQ=255)
                                                                                                                                           gTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAggg                                                                              <  5:140942/81‑1 (MQ=255)
                                                                                                                                           gTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAggg                                                                              >  6:140942/1‑81 (MQ=255)
                                                                                                                                            ttGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGccgatcaacggcgtggccctgctgatccccatcgcctttgccctcggcctgccgccggaatcggcgctgatcctgctggccgcagtgtacctgggctgcgaatatg              >  3:50081‑M2/1‑39 (MQ=255)
                                                                                                                                            ttGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGccgatcaacggcgtggccctgctgatccccatcgcctttgccctcggcctgccgccggaatcggcgctgatcctgctggccgcagtgtacctgggctgcgaatatg              <  4:50081‑M2/145‑107 (MQ=255)
                                                                                                                                            ttGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTTCTCCAGTACGCt           >  6:9373/1‑147 (MQ=255)
                                                                                                                                              gATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTTCTCCAGTACGCTcag        >  4:151183/1‑148 (MQ=255)
                                                                                                                                                tCGGcaccgtggtcggcctgctaccgggcctgggcccgatcaacggcgtggccctgctgatccccatcgcctttgccctcggcctgccgccggaatcggcgctgatcctgctggccgcagtgtacctgggctgcgaatatggcgggcg        >  4:116871‑M1/1‑4 (MQ=255)
                                                                                                                                                tCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGGTGCCCATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAATGTATCCATTTCAGTTCTCCAGTACGCTcagca      >  1:238261/1‑149 (MQ=255)
                                                                                                                                                   ggCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTTCTCCAGTACGCTCAGCAGGcc  <  3:88952/149‑1 (MQ=255)
                                                                                                                                                   gcaccgtggtcggcctgctaccgggcctgggcccgatcaacggcgtggccctgctgatccccatcgcctttgccctcggcctgccgccggaatcggcgctgatcctgctggccgcagtgtacctgggctgcgaatatggcgggcgtatc    <  3:359024‑M1/149‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
TTCGCCCGGGATGTTCAGCAGGATCGAGCTGATACGCCCGCCATATTCGCAGCCCAGGTACACTGCGGCCAGCAGGATCAGCGCCGATTCCGGCGGCAGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCCAGGTAGCTCAAGGTATCCATTTCAGTTCTCCAGTACGCTCAGCAGGCC  >  NC_002947/1616992‑1617286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.