New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1768537 | 64 (1.080) | 6 (0.110) | 4/242 | NT | 8.3% | coding (138/480 nt) | PP_1578 | hypothetical protein |
? | NC_002947 | = 1768606 | 72 (1.290) | coding (207/480 nt) | PP_1578 | hypothetical protein |
CGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1768437‑1768537 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtcagATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGGTGATCCCATCGGTGATCTC < NC_002947/1768606‑1768460 CGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCC > 2:16373/1‑149 CGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCC > 2:22201/1‑149 ACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCTGCATGGCGTGCACACCACCACCTGACCT < 1:16373/148‑1 ACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTG > 4:266311/1‑149 ACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCT < 1:22201/148‑1 ATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCATGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTC < 3:266311/149‑1 TCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGT < 5:235604/130‑1 TCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGT > 6:235604/1‑130 TCAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTATCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGGTGATCCCATCGGTGATC < 5:344027/149‑1 CAGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCACCAGTGTGATGGTCAGTTCGTCCCACCCTTTGGTCATCCAGTAGGAGGTGATCCCAACGGTGATCT > 6:21401/1‑149 AGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGGTGATCCCATCGGTGATCTC > 3:269788/1‑149 CGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1768437‑1768537 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtcagATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGGTGATCCCATCGGTGATCTC < NC_002947/1768606‑1768460 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |