New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 176853764 (1.080)6 (0.110) 4/242 NT 8.3% coding (138/480 nt) PP_1578 hypothetical protein
?NC_002947 = 1768606 72 (1.290)coding (207/480 nt) PP_1578 hypothetical protein

GCGCGATGAGCATTCTCAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATG  >  NC_002947/1768395‑1768684
                                                                                                                                              |                                                                                                                                                   
gcgcgATGAGCATTCTCAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCACTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAggtggtg                                                                                                                                               <  6:315810/149‑1 (MQ=255)
    gATGAGCATTCTCAAGAGGCTGTATTCCAGCTCTGGCCCGGATATCATTCATGAAGTGCTCGAGATCACCGAGGGGATAACCACCTACTGGATGACCAAATGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGgtgt                                                                                                                                           <  8:313405/149‑1 (MQ=255)
    gATGAGCATTCTCAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGgtgt                                                                                                                                           <  4:366846/149‑1 (MQ=255)
     aTGAGCATTCTCAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGtgtg                                                                                                                                          <  5:37523/149‑1 (MQ=255)
               tcAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGc                                                                                                                                >  1:199066/1‑149 (MQ=255)
               tcAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGc                                                                                                                                >  4:269788/1‑149 (MQ=255)
               tcAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGc                                                                                                                                >  8:240010/1‑149 (MQ=255)
                cAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCg                                                                                                                               >  1:369173/1‑149 (MQ=255)
                 aaGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGTCAGGTCAGGTGGTGGTGTGCACGCCATg                                                                                                                                 <  1:214260/146‑1 (MQ=255)
                 aaGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCgg                                                                                                                              <  4:97732/149‑1 (MQ=255)
                          tATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGAc                                                                                                                       <  7:15222/147‑1 (MQ=255)
                             gCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACTGGTCAggtggtggt                                                                                                                                             >  5:330776/1‑122 (MQ=255)
                             gCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAggtggtggt                                                                                                                                             <  6:330776/122‑1 (MQ=255)
                               cAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGgtgt                                                                                                                                           >  1:146362/1‑122 (MQ=255)
                               cAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGgtgt                                                                                                                                           <  2:146362/122‑1 (MQ=255)
                                       gCCCGGAGATCATTAATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGAAATGACAGGTGGTGGTGTGCACGACATGCGGCATGGACTTGGCCATTCCGgcg                                                                                                        >  4:107105/1‑149 (MQ=255)
                                        cccGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGgcgc                                                                                                       <  4:289195/149‑1 (MQ=255)
                                        cccGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGgcgc                                                                                                       <  7:233919/149‑1 (MQ=255)
                                          cGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgcc                                                                                                     >  2:16373‑M1/1‑101 (MQ=255)
                                          cGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgcc                                                                                                     >  2:22201‑M1/1‑101 (MQ=255)
                                          cGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGgcgcgc                                                                                                     <  3:102976/149‑1 (MQ=255)
                                                  attcatGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACAATGGACACAGGTCAGGTGCTGGTGTGCACGCCATCCGTCATGGACTTGGCCCTGCCGGCGCGCAacgacga                                                                                             >  5:21401/1‑149 (MQ=255)
                                                      atGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAacgacgacgc                                                                                          >  5:78727/1‑147 (MQ=255)
                                                        gAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCAc                                                                                       >  4:192668/1‑149 (MQ=255)
                                                              cTCGAGATCACCGATGGGATCACCACCTCTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGa                                                                                 >  1:129626/1‑148 (MQ=255)
                                                               tCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGgcgc                                                                                                       <  6:349602/126‑1 (MQ=255)
                                                               tCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGgcgc                                                                                                       >  5:349602/1‑126 (MQ=255)
                                                               tCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGAt                                                                                >  2:360804/1‑149 (MQ=255)
                                                                 gagaTCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATct                                                                              >  3:269788‑M2/1‑147 (MQ=255)
                                                                  agaTCACCGTTGGGATCACCTCCTACTGGATGACCAAAGGGTGGGACGAACTGACCATCACACTGGTGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATctg                                                                             >  6:21401‑M2/1‑146 (MQ=255)
                                                                   gaTCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGATAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATctga                                                                            <  5:344027‑M2/149‑5 (MQ=255)
                                                                       aCCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgctgcatggcgtgcacaccaccacctgacct                                                                         <  1:16373‑M1/148‑77 (MQ=255)
                                                                       aCCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctg                                                                        >  4:266311‑M1/1‑72 (MQ=255)
                                                                       aCCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacct                                                                         <  1:22201‑M1/148‑77 (MQ=255)
                                                                       aCCGATGGGATCACCACCTACTGGATGACCAAAGGCTGAGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTAGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGCTCTGACCtt                                                                        >  7:359548/1‑149 (MQ=255)
                                                                        ccGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTc                                                                       >  3:135108/1‑149 (MQ=255)
                                                                         cGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTcg                                                                      <  2:199066/149‑1 (MQ=255)
                                                                           aTGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGatcctgggtgccgtcgtcgttgcgcgccggcatggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctc                                                                    <  3:266311‑M1/149‑82 (MQ=255)
                                                                               gATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGCCGACGGCACCCAGGATCTGACCTTCGCGCt                                                                  >  4:340766/1‑147 (MQ=255)
                                                                               gATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCt                                                                  >  4:321462/1‑147 (MQ=255)
                                                                                aTCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAg                                                               >  8:243553/1‑149 (MQ=255)
                                                                                aTCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAg                                                               <  3:321462/149‑1 (MQ=255)
                                                                                   accaccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCaa                                                            <  7:217585/149‑1 (MQ=255)
                                                                                    ccaccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCaa                                                            >  5:103481/1‑148 (MQ=255)
                                                                                    ccaccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCaa                                                            >  5:124679/1‑148 (MQ=255)
                                                                                      accTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATctga                                                                            >  6:235604‑M2/1‑126 (MQ=255)
                                                                                      accTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATctga                                                                            <  5:235604‑M2/130‑5 (MQ=255)
                                                                                            tGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACgg                                                   >  3:270345/1‑149 (MQ=255)
                                                                                              gATGACCAAAGGCTGTGACGAACTGACCATAACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACgg                                                   <  3:107105/147‑1 (MQ=255)
                                                                                              gATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCaa                                                            <  4:142558/138‑1 (MQ=255)
                                                                                              gATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCaa                                                            >  3:142558/1‑138 (MQ=255)
                                                                                              gATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCa                                                 >  2:12466/1‑149 (MQ=255)
                                                                                              gATGACCAAAGGCTGGGACGAACTGACCATCACACTGCAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGAATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCa                                                 >  4:278070/1‑149 (MQ=255)
                                                                                               aTGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGATAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCAt                                                <  6:344027/149‑1 (MQ=255)
                                                                                                 gACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGTAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCg                                              >  8:279336/1‑149 (MQ=255)
                                                                                                    cAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCct                                           >  4:317077/1‑149 (MQ=255)
                                                                                                    cAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCct                                           >  4:14228/1‑149 (MQ=255)
                                                                                                     aaaGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCctc                                          >  4:340457/1‑149 (MQ=255)
                                                                                                      aaGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCctct                                         <  4:270345/149‑1 (MQ=255)
                                                                                                       aGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTg                                        <  7:240010/149‑1 (MQ=255)
                                                                                                             ggACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTc                                   <  3:192668/148‑1 (MQ=255)
                                                                                                              gACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGt                                 >  3:336264/1‑149 (MQ=255)
                                                                                                                     tGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCt                                     >  7:330736/1‑138 (MQ=255)
                                                                                                                     tGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCt                                     <  8:330736/138‑1 (MQ=255)
                                                                                                                     tGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCcgcg                            >  6:156519/1‑147 (MQ=255)
                                                                                                                          aTCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCt                     >  1:51113/1‑149 (MQ=255)
                                                                                                                           tCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTc                    >  2:318200/1‑149 (MQ=255)
                                                                                                                             acacTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCg                  <  7:243553/149‑1 (MQ=255)
                                                                                                                               acTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGAGTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCgg                 >  1:267548/1‑148 (MQ=255)
                                                                                                                                 tGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGACCTGCCGGCGCGCAACGACGACGGCACCAAGGATCTGACATTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGAt              >  5:304675/1‑149 (MQ=255)
                                                                                                                                   gagaCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGa                                                                                 <  6:128825/80‑1 (MQ=255)
                                                                                                                                   gagaCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGa                                                                                 >  5:128825/1‑80 (MQ=255)
                                                                                                                                   gagaCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCATGCCGGCGCGCAACGACGACGGCACCCAGGATctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggtggtgatcccat            <  3:266311‑M2/149‑69 (MQ=255)
                                                                                                                                     gaCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATgggt          <  4:135108/149‑2 (MQ=255)
                                                                                                                                      aCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGc          <  6:103481/148‑1 (MQ=255)
                                                                                                                                       caggtcaggtGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggtggtgatcccatcggt        >  4:266311‑M2/1‑77 (MQ=255)
                                                                                                                                        aggtcaggtGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggtggtgatcccatcggt        <  1:22201‑M2/148‑73 (MQ=255)
                                                                                                                                        aggtcaggtGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCCACGGCATCGCCTCTGGCTTAGTCCGCGCAGAGCTCCGGCATGGGCGTc       >  8:241716/1‑149 (MQ=255)
                                                                                                                                        aggtcaggtGGTGGTGTGCACGCCATGCAGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggtggtgatcccatcggt        <  1:16373‑M2/148‑73 (MQ=255)
                                                                                                                                          gtcaggtGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGa     <  1:318200/149‑1 (MQ=255)
                                                                                                                                           tCAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggt                       >  6:235604‑M1/1‑4 (MQ=255)
                                                                                                                                           tCAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggt                       <  5:235604‑M1/130‑127 (MQ=255)
                                                                                                                                           tCAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctatctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggtggtgatcccatcggtgatc    <  5:344027‑M1/149‑146 (MQ=255)
                                                                                                                                            cAGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtcaccagtgtgatggtcagttcgtcccaccctttggtcatccagtaggaggtgatcccaacggtgatct   >  6:21401‑M1/1‑3 (MQ=255)
                                                                                                                                             aggtGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAAt   <  1:360804/148‑1 (MQ=255)
                                                                                                                                             aGatcctgggtgccgtcgtcgttgcgcgccggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggtggtgatcccatcggtgatctc  >  3:269788‑M1/1‑2 (MQ=255)
                                                                                                                                              |                                                                                                                                                   
GCGCGATGAGCATTCTCAAGAGGCTGTATGCCAGCTCTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCGCGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATG  >  NC_002947/1768395‑1768684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.