New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2034207	50 (0.850)	3 (0.050)	3/244	NT	6.3%	intergenic (+23/+1418)	pgi‑I/PP_5477	glucose 6‑phosphate isomerase/hypothetical protein
	?	NC_002947	= 2034235	42 (0.750)					intergenic (+51/+1390)	pgi‑I/PP_5477	glucose 6‑phosphate isomerase/hypothetical protein

TTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAATTACTTTCGTGGTAAACACCGTGGCTGACCCTGCTTGATACTGGCCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2034090‑2034207 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgACCACCAGCTCCGCTCGGACGCTCCTCCCGCCGGGCCAGTATCAAGCAGGGTCAGCCACGGTGTTTACCACGAAAGTAATTGATCAGGCCTTGGGTGGAACCGTCTTCGGCGCTGTCTTCCAGGCTACCGACCAAGCGCTGGTAAACG  <  NC_002947/2034235‑2034088                                                                                                                                                                                                                                                                            TTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAATTACTTTCGTGGTAAACACCGTGGCTGACCCTGCTTGATACTGGCCCGGCGACCACCAGCTCCGCTCGGACGCTCCTCCCGC                                                                                                                       >  7:160030/1‑149     CCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAATTACTTTCGTGGTAAACACCGTGGCTGACCCTGCTTGATACTGGCCCGGCGACCACCAGCTCCGCTCGGACGCTCCTCCCGCCGG                                                                                                                    <  8:160030/148‑1      CAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAATTACTTTCGTGGTAAACACCGTGGCTGACCCTGCTTGATACTGGCCCGGCGACCACCAGCTCCGCTCGGACGCTCCTCCCGCCGGGC                                                                                                                  <  8:313148/149‑1                                                                                                                  CGGCGACCACCAGCTCCGCTCGGACGCTCCTCCCGCCGGGCCAGTATCAAGCAGGGTCAGCCACGGTGTTTACCACGAAAGTAATTGATCAGGCCTTGGGTGGAACCGTCTTCGGCGCTGTCTTCCAGGCTACCGACCAAGCGCTGGT       <  3:364413/148‑1                                                                                                                      GACCACCAGCTCCGCTCGGACGCTCCTCCCGCCGGGCCAGTATCAAGCAGGGTCAGCCACGGTGTTTACCACGAAAGTAATTGATCAGGCCTTGGGTGGAACCGTCTTCGGCGCTGTCTTCCAGGCTACCGACCAAGCGCTGGTAAACG  <  4:149607/149‑1                                                                                                                                                                                                                                                                            TTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAATTACTTTCGTGGTAAACACCGTGGCTGACCCTGCTTGATACTGGCCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2034090‑2034207 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgACCACCAGCTCCGCTCGGACGCTCCTCCCGCCGGGCCAGTATCAAGCAGGGTCAGCCACGGTGTTTACCACGAAAGTAATTGATCAGGCCTTGGGTGGAACCGTCTTCGGCGCTGTCTTCCAGGCTACCGACCAAGCGCTGGTAAACG  <  NC_002947/2034235‑2034088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.