| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2054923 | 51 (0.860) | 4 (0.070) | 4/242 | NT | 8.4% | coding (64/1092 nt) | aroC | chorismate synthase |
| ? | NC_002947 | = 2054952 | 39 (0.700) | coding (93/1092 nt) | aroC | chorismate synthase | |||||
GTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2054772‑2054923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccggTGGGCATCCATCGACAATGGCGACCAACGCCGGGCCATGGCTCTCGCCAGCGGTGGTGACAGTGAACAGCTTGCCGTAGGTATTGCCGGACATGGACGCTCCGCGAGTTCTGCCTGAAATGGACGAAA < NC_002947/2054952‑2054825 GTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCC > 1:118326/1‑149GTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCC > 1:366199/1‑149 GCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGTGGGCATCCATC > 7:89971/1‑148 TATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGTGGGCATCCATCGACAATGGCGACCAACGCCGGGCCATG < 8:89971/149‑1 TGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGTGGGCATCCATCGACAATGGCGACCAACGCCGGGCCA < 1:21927/142‑1 TGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGTGGGCATCCATCGACAATGGCGACCAACGCCGGGCCA > 2:21927/1‑142 GGTGGGCATCCATCGACAATGGCGACCAACGCCGGGCCATGGCTCTCGCCAGCGGTGGTGACAGTGAACAGCTTGCCGTAGGTATTGCCGGACATGGACGCTCCGCGAGTTCTGCCTGAAATGGACGAAA < 7:30806/130‑1 GGTGGGCATCCATCGACAATGGCGACCAACGCCGGGCCATGGCTCTCGCCAGCGGTGGTGACAGTGAACAGCTTGCCGTAGGTATTGCCGGACATGGACGCTCCGCGAGTTCTGCCTGAAATGGACGAAA > 8:30806/1‑130 GTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2054772‑2054923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccggTGGGCATCCATCGACAATGGCGACCAACGCCGGGCCATGGCTCTCGCCAGCGGTGGTGACAGTGAACAGCTTGCCGTAGGTATTGCCGGACATGGACGCTCCGCGAGTTCTGCCTGAAATGGACGAAA < NC_002947/2054952‑2054825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |