New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2110129 | 84 (1.420) | 5 (0.090) | 4/246 | NT | 6.0% | coding (4157/4899 nt) | PP_1882 | membrane protein |
? | NC_002947 | = 2110150 | 77 (1.360) | coding (4136/4899 nt) | PP_1882 | membrane protein |
CCCGCCAGATGCTGTAGCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2109995‑2110129 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAACTACTACGGCTATTGCCAAGGCAACCCGATAACCTTCCGCGACCCGACCGGGCATTACAGCATCGGCTACAGCGGGCAAAGCCGATCGCTGGCAGACCTGAATAGCTACAG < NC_002947/2110150‑2110006 CCCGCCAGATGCTGTAGCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCC > 6:263596/1‑149 GCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGC < 5:263596/149‑1 GCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGC < 5:286658/149‑1 TGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAA < 3:100438/118‑1 TGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAA > 4:100438/1‑118 CCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAACTACTACGGCTATTGCCAAGGCAACCCGATAACCTTCCGCGACCCGACCGGGCATTACAGCATCGGCTACAGCGGGCAAAGCCGATCGCTGGCAGACCTGAATAGCTACAG < 1:92457/149‑1 CCGACGCACTCAGCCCCTTCGGCGCGGGGGGGTTGAACTACTACGGCTATTGCCAAGGCAACCCGATAACCTTCCGCGACCCGACCGGGCATTACAGCATCGGCTACAGCGGGCAAAGCCGATCGCTGGCAGACCTGAATAGCTACAG > 2:359212/1‑148 CCCGCCAGATGCTGTAGCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2109995‑2110129 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAACTACTACGGCTATTGCCAAGGCAACCCGATAACCTTCCGCGACCCGACCGGGCATTACAGCATCGGCTACAGCGGGCAAAGCCGATCGCTGGCAGACCTGAATAGCTACAG < NC_002947/2110150‑2110006 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |