New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 211012984 (1.420)5 (0.090) 4/246 NT 6.0% coding (4157/4899 nt) PP_1882 membrane protein
?NC_002947 = 2110150 77 (1.360)coding (4136/4899 nt) PP_1882 membrane protein

CCCGCCAGATGCTGTAGCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2109995‑2110129
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAACTACTACGGCTATTGCCAAGGCAACCCGATAACCTTCCGCGACCCGACCGGGCATTACAGCATCGGCTACAGCGGGCAAAGCCGATCGCTGGCAGACCTGAATAGCTACAG  <  NC_002947/2110150‑2110006
                                                                                                                                                                                                                                                                                        
CCCGCCAGATGCTGTAGCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCC                                                                                                                                     >  6:263596/1‑149
                GCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGC                                                                                                                     <  5:263596/149‑1
                GCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGC                                                                                                                     <  5:286658/149‑1
                                                   TGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAA                                                                                                                 <  3:100438/118‑1
                                                   TGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAA                                                                                                                 >  4:100438/1‑118
                                                                                                                                   CCCGACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAACTACTACGGCTATTGCCAAGGCAACCCGATAACCTTCCGCGACCCGACCGGGCATTACAGCATCGGCTACAGCGGGCAAAGCCGATCGCTGGCAGACCTGAATAGCTACAG  <  1:92457/149‑1
                                                                                                                                    CCGACGCACTCAGCCCCTTCGGCGCGGGGGGGTTGAACTACTACGGCTATTGCCAAGGCAACCCGATAACCTTCCGCGACCCGACCGGGCATTACAGCATCGGCTACAGCGGGCAAAGCCGATCGCTGGCAGACCTGAATAGCTACAG  >  2:359212/1‑148
                                                                                                                                                                                                                                                                                        
CCCGCCAGATGCTGTAGCTATTCAGGTCTGCCAGCGATCGGCTTTGCCCGCTGTAGCCGATGCTGTAATGCCCGGTCGGGTCGCGGAAGGTTATCGGGTTGCCTTGGCAATAGCCGTAGTAGTTCAGCCCCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2109995‑2110129
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgACGCACTCAGCCCCTTCGGCGCGGGGGGGCTGAACTACTACGGCTATTGCCAAGGCAACCCGATAACCTTCCGCGACCCGACCGGGCATTACAGCATCGGCTACAGCGGGCAAAGCCGATCGCTGGCAGACCTGAATAGCTACAG  <  NC_002947/2110150‑2110006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.