| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2202174 = | 36 (0.610) | 5 (0.090) | 5/238 | NT | 12.0% | intergenic (+31/‑150) | PP_1946/PP_1947 | short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein |
| ? | NC_002947 | 2202214 = | 40 (0.730) | intergenic (+71/‑110) | PP_1946/PP_1947 | short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein | |||||
CAATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2202326‑2202174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaggcgcaCTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAGTTCAATTGAACAATCAAGATTTGGTTAAGGTGCTT > NC_002947/2202214‑2202353 CAATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGG > 1:165542/1‑149 AATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGC > 1:240854/1‑149 AATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGC < 4:134500/149‑1 AATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGC < 5:200792/149‑1 AATTGAACTCTACATTTATTGCAGTGGCAAAAAGTATGAGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGC < 8:173753/149‑1 TTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATG > 3:358613/1‑146 ATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAG > 1:301448/1‑149 CGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGC > 1:78151/1‑130 CGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGC < 2:78151/130‑1 ACCAAGCAATGGCGAGAACTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAGTTCAATTGAACAATC < 2:301448/147‑1 CTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAGTTCAATTGAACAATCAAGATTTGGTTAAGGTGCTT < 6:12089/149‑1 CTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAGTTCAATTGAACAATCAAGATTTGGTTAAGGTGCTT < 8:92652/149‑1 TAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAGTTCAATTGAACAATCAAGATTTGGTTAAGGTGCTT > 8:252289/1‑148 GCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAGTTCAATT < 3:179092/117‑1 GCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAGTTCAATT > 4:179092/1‑117 CAATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2202326‑2202174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaggcgcaCTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGAGTTCAATTGAACAATCAAGATTTGGTTAAGGTGCTT > NC_002947/2202214‑2202353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |