New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2303118	44 (0.740)	4 (0.070)	4/236	NT	7.5%	intergenic (‑203/+92)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
	?	NC_002947	= 2303178	58 (1.060)					intergenic (‑263/+32)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein

ACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2302968‑2303118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT‑GGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTAC  <  NC_002947/2303178‑2303032                                                                                                                                                                                                                                                                                                             ACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGG                                                                                                                                                        >  4:1361/1‑149                               CCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCC                                                                                                                           >  1:300104/1‑148                                                                    ATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT‑GGGAGCGGGCGTGCCC                                                                                    <  2:300104/149‑1                                                                         TAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT‑GGGAGCGGGC                                                                                          >  1:100231/1‑138                                                                         TAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT‑GGGAGCGGGC                                                                                          <  2:100231/138‑1                                                                                                                                                     GCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT‑GGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTA   <  6:291957/149‑1                                                                                                                                                     GCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT‑GGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTA   >  6:333289/1‑149                                                                                                                                                      CATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT‑GGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTAC  <  3:303458/149‑1                                                                                                                                                       ATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTAC  >  1:284705/1‑149                                                                                                                                                                                                                                                                                                             ACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2302968‑2303118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT‑GGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTAC  <  NC_002947/2303178‑2303032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.