New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2329127 =	50 (0.850)	4 (0.070)	4/238	NT	7.5%	coding (715/1239 nt)	PP_2047	3‑hydroxyacyl‑CoA dehydrogenase family protein
	?	NC_002947	2329196 =	52 (0.950)					coding (784/1239 nt)	PP_2047	3‑hydroxyacyl‑CoA dehydrogenase family protein

TGCTCGGCCTGCCGGCTGCCGGGGGCATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGGTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2329281‑2329127 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcgatAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAGCATGACCCGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGT  >  NC_002947/2329196‑2329339                                                                                                                                                                                                                                                                                                             TGCTCGGCCTGCCGGCTGCCGGGGGCATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAG                                                                                                                                                        >  5:35559/1‑149  GCTCGGCCTGCCGGCTGCCGGGGGCATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGG                                                                                                                                                       >  5:213923/1‑149   CTCGGCCTGCCGGCTGCCGGGGGCATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTACACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGGT                                                                                                                                                      >  1:7586/1‑149    TCGGCCTGCCGGCTGCCGGGGGCATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGGTC                                                                                                                                                     >  5:90792/1‑149     CGGCCTGCCGGCTGCCGGGGGCATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGGTCG                                                                                                                                                    <  1:331989/149‑1                           ATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGG                                                                                                                                                       <  3:308882/124‑1                           ATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGG                                                                                                                                                       >  4:308882/1‑124                                                                                     TTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGGTCGATAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAG                                                                    >  1:244394/1‑149                                                                                           ACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGGTCGATAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAG                                                              >  4:23728/1‑149                                                                                                         GTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGGTCGATAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAGCATGACCCGCAGGT                                                <  2:244394/149‑1                                                                                                                            GCCAACTGCCGGGCGCGCCACTCCAGGTCGATAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAGCATGACCCGCAGGTCGACGCGTTGGTGCTGCAG                             <  3:23728/149‑1                                                                                                                                                    AGGTCGATAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAGCATGACCCGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGA     <  3:67140/149‑1                                                                                                                                                      GTCGATAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAGCATGACCCGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTG             >  5:30547/1‑139                                                                                                                                                      GTCGATAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAGCATGACCCGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTG             <  6:30547/139‑1                                                                                                                                                      GTCGATAATGCGCTGTGCGAGCTCGGACGCCTTGGGCAGAAGACCGGGCAGGGCTATTAACACTATGCCCCAGGCAGCCGACAGGCCGAGCATGACCCGCAGGTCGACGCGTTGGTGCTGCAGGTGACCCAGAACCATGGCAACCCAC    >  7:56923/1‑148                                                                                                                                                       TCGATAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAGCATGACCCGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGT  >  3:329820/1‑149                                                                                                                                                                                                                                                                                                             TGCTCGGCCTGCCGGCTGCCGGGGGCATAGCGGTAATAGCCCTGCCCGGTCTTCTGCCCAAGGCGGCCGAGCTCGCACAGCGCATTATCGACCTGCACCAGCGGGTCGTGCATGCCTTGCCCGGCCAACTGCCGGGCGCGCCACTCCAGGTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2329281‑2329127 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcgatAATGCGCTGTGCGAGCTCGGCCGCCTTGGGCAGAAGACCGGGCAGGGCTATTACCGCTATGCCCCCGGCAGCCGGCAGGCCGAGCATGACCCGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGT  >  NC_002947/2329196‑2329339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.