New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2356339	63 (1.070)	4 (0.070)	4/246	NT	6.1%	coding (483/711 nt)	PP_2070	AraC family transcriptional regulator
	?	NC_002947	= 2356360	63 (1.110)					coding (462/711 nt)	PP_2070	AraC family transcriptional regulator

GCGCTGGCGCTCTGGTAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2356187‑2356339 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggCGCACAACTGAACATGAGTGCCCGCAGTGTGGCCAGGCTGTTCCAGCGCGAGGTGGGCATGTCGTATGGCCAATGGCGCGCCCGTGCCCGGGTGATGCTCAGCCAGCAATGCCTGGCCGATGGCAAGCCGATCCTGAACGTTGCGCT  <  NC_002947/2356360‑2356214                                                                                                                                                                                                                                                                                                              GCGCTGGCGCTCTGGTAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACT                                                                                                                                                         >  4:364287/1‑149   GCTGGCGCTCTGGTAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGC                                                                                                                                                       >  3:365585/1‑149                                                                      TGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGCGCACAACTGAACATGAGTGCCCGCAGTGT                                                                                                                       >  7:342024/1‑114                                                                      TGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGCGCACAACTGAACATGAGTGCCCGCAGTGT                                                                                                                       <  8:342024/114‑1                                                                          TGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGCGCACAACTGAACATGAGTGCCCGCAGTG                                                                                                                        >  3:9280/1‑109                                                                          TGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGCGCACAACTGAACATGAGTGCCCGCAGTG                                                                                                                        <  4:9280/109‑1                                                                                                                                                        GGCGCACAACTGAACATGAGTGCCCGCAGTGTGGCCAGGCTGTTCCAGCGCGAGGTGGGCATGTCGTATGGCCAATGGCGCGCCCGTGCCCGGGTGATGCTCAGCCAGCAATGCCTGGCCGATGGCAAGCCGATCCTGAACGTTGCGCT  <  3:170898/149‑1                                                                                                                                                                                                                                                                                                              GCGCTGGCGCTCTGGTAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2356187‑2356339 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggCGCACAACTGAACATGAGTGCCCGCAGTGTGGCCAGGCTGTTCCAGCGCGAGGTGGGCATGTCGTATGGCCAATGGCGCGCCCGTGCCCGGGTGATGCTCAGCCAGCAATGCCTGGCCGATGGCAAGCCGATCCTGAACGTTGCGCT  <  NC_002947/2356360‑2356214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.