New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2356339	63 (1.070)	4 (0.070)	4/246	NT	6.1%	coding (483/711 nt)	PP_2070	AraC family transcriptional regulator
	?	NC_002947	= 2356360	63 (1.110)					coding (462/711 nt)	PP_2070	AraC family transcriptional regulator

GCTCTGGTAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTAC  >  NC_002947/2356195‑2356486                                                                                                                                                 |                                                                                                                                                    gctCTGGTCGCCGTGCTCCGGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCCCCCGGGCACGGGCGCGCCCTTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCAc                                                                                                                                                 >  4:43505/1‑149 (MQ=255) gctCTGGTAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCAc                                                                                                                                                 >  3:308883/1‑149 (MQ=255)     tGGTAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCAt                                                                                                                                             >  6:298092/1‑149 (MQ=255)        tAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGtt                                                                                                                                          <  3:200486/149‑1 (MQ=255)          gCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCa                                                                                                                                        <  4:365585/149‑1 (MQ=255)          gCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCa                                                                                                                                        <  5:298092/149‑1 (MQ=255)            cGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGt                                                                                                                                      >  3:160147/1‑149 (MQ=255)                 tCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTgc                                                                                                                                 >  1:202032/1‑149 (MQ=255)                   cAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTgc                                                                                                                                 <  3:116111/147‑1 (MQ=255)                   cAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTgc                                                                                                                                 <  3:7871/147‑1 (MQ=255)                    aGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGcc                                                                                                                              <  3:170898‑M2/149‑3 (MQ=255)                           cGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGc                                                                                                                       >  6:152218/1‑149 (MQ=255)                             ttCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTc                                                                                                                     <  5:211645/149‑1 (MQ=255)                                 ggctccgCTTGCCATCGGCCAGGCACTGCTCGCCGAGCATCACCCGCGCACGGGCGCGCCATTGGCCATACGACATGCCCCCCTCGCGCCGGAACCGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAgg                                                                                                                 <  8:253614/143‑1 (MQ=255)                                 ggATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAgg                                                                                                                 >  3:111675/1‑149 (MQ=255)                                  gATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAggg                                                                                                                >  3:111258/1‑149 (MQ=255)                                    tCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTc                                                                                                              <  4:205465/149‑1 (MQ=255)                                      ggCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCa                                                                                                             <  3:364287/148‑1 (MQ=255)                                           gCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTg                                                                                                                        >  6:211438/1‑132 (MQ=255)                                           gCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTg                                                                                                                        <  5:211438/132‑1 (MQ=255)                                              aTCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAg                                                                                                                  >  3:126860/1‑135 (MQ=255)                                              aTCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAg                                                                                                                  <  4:126860/135‑1 (MQ=255)                                              aTCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTggg                                                                                                    <  4:308883/149‑1 (MQ=255)                                               tCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCa                                                                                                                   <  3:326103/133‑1 (MQ=255)                                               tCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCa                                                                                                                   >  4:326103/1‑133 (MQ=255)                                                   ccAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCggg                                                                                               <  4:111675/149‑1 (MQ=255)                                                    cAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGt                                                                                              >  5:357801/1‑149 (MQ=255)                                                          ttGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCa                                                                                        <  2:202032/149‑1 (MQ=255)                                                              tggctgAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGcgcacaactgaacatgagtgcccgcagtgt                                                                                                                       >  7:342024‑M1/1‑84 (MQ=255)                                                              tggctgAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGcgcacaactgaacatgagtgcccgcagtgt                                                                                                                       <  8:342024‑M1/114‑31 (MQ=255)                                                               ggctgAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAg                                                                                   >  3:6217/1‑149 (MQ=255)                                                                gctgAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGaa                                                                                    <  3:260849/147‑1 (MQ=255)                                                                  tgAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGcgcacaactgaacatgagtgcccgcagtg                                                                                                                        <  4:9280‑M1/109‑30 (MQ=255)                                                                  tgAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGcgcacaactgaacatgagtgcccgcagtg                                                                                                                        >  3:9280‑M1/1‑80 (MQ=255)                                                                    aGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGaa                                                                                    >  5:64741/1‑143 (MQ=255)                                                                    aGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGaa                                                                                    <  6:64741/143‑1 (MQ=255)                                                                     gCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCg                                                                             <  4:160147/149‑1 (MQ=255)                                                                      cATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCg                                                                             >  8:325316/1‑148 (MQ=255)                                                                      cATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCg                                                                             >  1:106820/1‑148 (MQ=255)                                                                        tCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCAc                                                                          <  7:1554/149‑1 (MQ=255)                                                                          aCCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCAc                                                                          >  1:376203/1‑147 (MQ=255)                                                                           cccGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGc                                                                                                   >  1:3854/1‑121 (MQ=255)                                                                           cccGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGGCAGGTCCTGGGc                                                                                                   <  2:3854/121‑1 (MQ=255)                                                                              gggCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCa                                                                    <  6:357801/149‑1 (MQ=255)                                                                               ggCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCAc                                                                   <  4:6217/149‑1 (MQ=255)                                                                                     ggCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGgc                                                             <  2:376203/149‑1 (MQ=255)                                                                                      gcgcgcCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACTCTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCggg                                                                                               <  4:270203/114‑1 (MQ=255)                                                                                      gcgcgcCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGAGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCggg                                                                                               >  3:270203/1‑114 (MQ=255)                                                                                       cgcgcCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCAt                                                                                                                          <  3:12122/86‑1 (MQ=255)                                                                                       cgcgcCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCAt                                                                                                                          >  4:12122/1‑86 (MQ=255)                                                                                       cgcgcCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCACCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGgcgt                                                           >  4:275087/1‑149 (MQ=255)                                                                                        gcgcCCTTGGGCATACGGCATGGCCACCGCGCGCTGGCACAGCCTGGCCACACTGGGGGCACACATGTTCAGTTGTGCGCCGCATTGCTCCAGGGGGAGGTCCTGGGGCGGGTGCTGCAGGTATCGGGCGGAACAGGCACGCAGgcccg                                                          >  6:188644/1‑146 (MQ=255)                                                                                                    aTACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGgcgtgcgt                                                       >  4:47783/1‑140 (MQ=255)                                                                                                    aTACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGgcgtgcgt                                                       <  3:47783/140‑1 (MQ=255)                                                                                                      aCGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGGCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTc                                            <  3:43505/149‑1 (MQ=255)                                                                                                       cGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCg                                           >  3:261772/1‑149 (MQ=255)                                                                                                        gACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTgcg                                                 >  8:361349/1‑142 (MQ=255)                                                                                                        gACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTgcg                                                 <  7:361349/142‑1 (MQ=255)                                                                                                             gCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACg                                      >  6:128437/1‑148 (MQ=255)                                                                                                              cccACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGaa                                    <  3:376574/149‑1 (MQ=255)                                                                                                               ccACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGcc                                                                                                  <  1:87859/86‑1 (MQ=255)                                                                                                               ccACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGcc                                                                                                  >  2:87859/1‑86 (MQ=255)                                                                                                                       cgcTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGAt                           <  5:152218/149‑1 (MQ=255)                                                                                                                          tGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATgcg                        >  7:122624/1‑149 (MQ=255)                                                                                                                                aGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATgc                         >  4:352185/1‑142 (MQ=255)                                                                                                                                aGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATgc                         <  3:352185/142‑1 (MQ=255)                                                                                                                                 gCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGggcg                 <  4:173598/149‑1 (MQ=255)                                                                                                                                         acacTGCGGGCACTCATGTTCAGTTGTGCGccgcagtgtggccaggctgttccagcgcgaggtgggcatgtcgtatggccaatggcgcgcccgtgcccgggtgatgctcagcca                                            >  7:342024‑M2/1‑30 (MQ=255)                                                                                                                                         acacTGCGGGCACTCATGTTCAGTTGTGCGccgcagtgtggccaggctgttccagcgcgaggtgggcatgtcgtatggccaatggcgcgcccgtgcccgggtgatgctcagcca                                            <  8:342024‑M2/114‑85 (MQ=255)                                                                                                                                         acacTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCACGCctgcgtgcctggt                                                <  4:62277/110‑6 (MQ=255)                                                                                                                                          cacTGCGGGCACTCATGTTCAGTTGTGCGccgcagtgtggccaggctgttccagcgcgaggtgggcatgtcgtatggccaatggcgcgcccgtgcccgggtgatgctca                                                >  3:9280‑M2/1‑29 (MQ=255)                                                                                                                                          cacTGCGGGCACTCATGTTCAGTTGTGCGccgcagtgtggccaggctgttccagcgcgaggtgggcatgtcgtatggccaatggcgcgcccgtgcccgggtgatgctca                                                <  4:9280‑M2/109‑81 (MQ=255)                                                                                                                                           acTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAg                                   >  8:139988/1‑121 (MQ=255)                                                                                                                                           acTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAg                                   <  7:139988/121‑1 (MQ=255)                                                                                                                                               cGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTa   <  8:122624/149‑1 (MQ=255)                                                                                                                                                gggCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTa   >  8:174918/1‑148 (MQ=255)                                                                                                                                                ggcgcacaactgaacatgagtgcccgcagtgtggccaggctgttccagcgcgaggtgggcatgtcgtatggccaatggcgcgcccgtgcccgggtgatgctcagccagcaatgcctggccgatggcaagccgatcctgaacgttgcgct  <  3:170898‑M1/149‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GCTCTGGTAGCCGTGCTCCAGCGCAACGTTCAGGATCGGCTTGCCATCGGCCAGGCATTGCTGGCTGAGCATCACCCGGGCACGGGCGCGCCATTGGCCATACGACATGCCCACCTCGCGCTGGAACAGCCTGGCCACACTGCGGGCACTCATGTTCAGTTGTGCGCCGCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTAC  >  NC_002947/2356195‑2356486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.