New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2357793	78 (1.320)	4 (0.070)	4/242	NT	5.3%	coding (518/825 nt)	PP_2072	AraC family transcriptional regulator
	?	NC_002947	= 2357821	68 (1.220)					coding (490/825 nt)	PP_2072	AraC family transcriptional regulator

TCGAGGCGGCGCAGGGTGACAAAGCGATAGGGGCTGGTGCCGTACAGCGTGCGAAAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2357640‑2357793 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgcAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGAGCCTTCATCATGGAACACCTGCATGTGGGCATAACACTGGACATGCTGGAACAGGCCAGTGGCCGCGAACGCTGGAGCCTGTCGCGGGACTTTCGCACGCTGTACGGCAC  <  NC_002947/2357821‑2357676                                                                                                                                                                                                                                                                                                              TCGAGGCGGCGCAGGGTGACAAAGCGATAGGGGCTGGTGCCGTACAGCGTGCGAAAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCG                                                                                                                                                         >  6:280333/1‑149   GAGGCGGCGCAGGGTGACAAAGCGATAGGGGCTGGTGCCGTACAGCGTGCGAAAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGG                                                                                                                                                        <  5:151660/148‑1                            TAGGGGCTGGTGCCGTACAGCGTGCGAAAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGG                                                                                                                                                        <  7:215854/123‑1                            TAGGGGCTGGTGCCGTACAGCGTGCGAAAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGG                                                                                                                                                        >  8:215854/1‑123                                            ACAGCGTGCGAAAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGGGCGCAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGA                                                                                                                >  2:215259/1‑147                                            ACAGCGTGCGAAAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGGGCGCAAGCGCCAGGATTACCAGGCAGCCGAACGCGCCCGA                                                                                                                <  1:215259/147‑1                                                       AAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGGGCGCAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGAGCC                                                                                                             <  1:313294/139‑1                                                       AAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGGGCGCAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGAGCC                                                                                                             >  2:313294/1‑139                                                                                                                                                      GGCGCAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGAGCCTTCATCATGGAACACCTGCATGTGGGCATAACACTGGACATGCTGGAACAGGCCAGTGGCCGCGAACGCTGGAGCCTGTCGCGGGACTTTCGCACGCTGTACGGC    <  5:377845/149‑1                                                                                                                                                        CGCAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGAGCCTTCATCATGGAACACCTGCATGTGGGCATAACACTGGACATGCTGGAACAGGCCAGTGGCCGCGAACGCTGGAGCCTGTCGCGGGACTTTCGCACGCTGTACGGCAC  >  4:27373/1‑149                                                                                                                                                         GCAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGAGCCTTCATCATGGAACACCTGCATGTGGGCATAACACTGGACATGCTGGAACAGGCCAGTGGCCGCGAACGCTGGAGCCTGTCGCGGGACTTTCGCACG             >  7:243126/1‑137                                                                                                                                                         GCAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGAGCCTTCATCATGGAACACCTGCATGTGGGCATAACACTGGACATGCTGGAACAGGCCAGTGGCCGCGAACGCTGGAGCCTGTCGCGGGACTTTCGCACG             <  8:243126/137‑1                                                                                                                                                                                                                                                                                                              TCGAGGCGGCGCAGGGTGACAAAGCGATAGGGGCTGGTGCCGTACAGCGTGCGAAAGTCCCGCGACAGGCTCCAGCGTTCGCGGCCACTGGCCTGTTCCAGCATGTCCAGTGTTATGCCCACATGCAGGTGTTCCATGATGAAGGCTCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2357640‑2357793 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgcAAGCGCCTGGATTACCAGGCAGCCGAACGCGCCCGAGCCTTCATCATGGAACACCTGCATGTGGGCATAACACTGGACATGCTGGAACAGGCCAGTGGCCGCGAACGCTGGAGCCTGTCGCGGGACTTTCGCACGCTGTACGGCAC  <  NC_002947/2357821‑2357676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.