| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2434743 = | 45 (0.760) | 4 (0.070) | 4/242 | NT | 8.4% | coding (55/465 nt) | PP_2133 | hypothetical protein |
| ? | NC_002947 | 2434791 = | 45 (0.810) | coding (103/465 nt) | PP_2133 | hypothetical protein | |||||
GGCTTGGCGGCTCCTTTTCCAGCCAGTGCGGCCACTGCTGCGGCGCCAGTTGCATGGCCAAACCCATGCGCCGCGCCTCCAGGCGCAACTTCATCTGCTCGCTCTGCTTGCGCGAGCTGCGCAGCCAGGAAAGCGGGCTGAGAATCAGCGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2434896‑2434743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaagCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAAGGAGCCGCCAAGCCCCTGCCCGCAGTATCACAGAGCCCGGCGCCGTGGGCATGAG > NC_002947/2434791‑2434937 GGCTTGGCGGCTCCTTTTCCAGCCAGTGCGGCGACTGCTGCGGCGCCAGTTGCATGGCCAAACCCATGCGCCGCGCCTCCAGGCGCAACTTCATCTGCTCGCTCTGCTTGCGCGAGCTGCGCAGCCAGGAAAGCGGGCTGAGAATCAGC < 6:365450/149‑1 GCTCTGCTTGCGCGAGCTGCGCAGCCAGGAAAGCGGGCTGAGAATCAGCGCAAGCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAAG > 2:342781/1‑147 TCTGCTTGCGCGAGCTGCGCAGCCAGGAAAGCGGGCTGAGAATCAGCGCAAGCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAA > 1:221703/1‑144 TCTGCTTGCGCGAGCTGCGCAGCCAGGAAAGCGGGCTGAGAATCAGCGCAAGCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAA < 2:221703/144‑1 CAGCCAGGAAAGCGGGCTGAGAATCAGCGCAAGCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAAGGAGCCGCCAAGCCCCTGCCCGCA < 1:342781/149‑1 GCGCAAGCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAAGGAGCCGCCAAGCCCCTGCCCGCAGTATCACAGAGCCCGGCGCCGTGGG > 2:339025/1‑148 GCGCAAGCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAAGGAGCCGCCAAGCCCCTGCCCGCAGTATCACAGAGCCCGGCGCCGTGG < 8:363065/147‑1 AAGCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAAGGAGCCGCCAAGCCCCTGCCCGCAGTATCACAGAGCCCGGCGCCGTGGGCAT > 5:265442/1‑147 AGCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGAGTAGCATGGGTTTGGCCATGCTACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAAGGAGTCTCCAAGCCCCTGCCCGCAGTATCACAGATCCCGGCGCCGTGGGCATGAG < 6:366783/149‑1 GGCTTGGCGGCTCCTTTTCCAGCCAGTGCGGCCACTGCTGCGGCGCCAGTTGCATGGCCAAACCCATGCGCCGCGCCTCCAGGCGCAACTTCATCTGCTCGCTCTGCTTGCGCGAGCTGCGCAGCCAGGAAAGCGGGCTGAGAATCAGCGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2434896‑2434743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaagCAGAGCGAGCAGATGAAGTTGCGCCTGGAGGCGCGGCGCATGGGTTTGGCCATGCAACTGGCGCCGCAGCAGTGGCCGCACTGGCTGGAAAAGGAGCCGCCAAGCCCCTGCCCGCAGTATCACAGAGCCCGGCGCCGTGGGCATGAG > NC_002947/2434791‑2434937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |