New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2464934 =	42 (0.710)	6 (0.100)	6/248	NT	12.5%	coding (704/1353 nt)	PP_2157	sensor histidine kinase
	?	NC_002947	2464973 =	43 (0.750)					coding (665/1353 nt)	PP_2157	sensor histidine kinase

GAACGCGATGCTGCAGCGCCTGGACGATGCCTTCCAGCGCCTGTCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2464981‑2464934 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTGGCCCATCTGCCGCAATGGGCGCAGGCCGCTGCGGGCGGCCCAGGCAC  >  NC_002947/2464973‑2465120                                                                                                                                                                                                      GAACGCGATGCTGCAGCGCCTGGACGATGCCTTCCAGCGCCTGTCAGCATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTG                                                 >  1:38460/1‑149   ACGCGATGCTGCAGCGCCTGGACGATGCCTTCCAGCGCCTGTCAGCATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTGGC                                               <  2:38460/149‑1    CGCGATGCTGCAGCGCCTGGACGATGCCTTCCAGCGCCTGTCAGCATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGT                                                                                     <  5:315943/110‑1    CGCGATGCTGCAGCGCCTGGACGATGCCTTCCAGCGCCTGTCAGCATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGT                                                                                     >  6:315943/1‑110       GATGCTGCAGCGCCTGGACGATGCCTTCCAGCGCCTGTCAGCATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTGGCCCAT                                           >  5:170076/1‑149                                   CAGCGCCTGTCAGCATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTGGCCCATCTGCCGCAATGGGCGCAGGCCGCTGCGG               <  6:170076/149‑1                                                CATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTGGCCCATCTGCCGCAATGGGCGCAGGCCGCTGCGGGCGGCCCAGGCAC  >  6:284124/1‑149                                                CATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTGGCCCATCTGCCGCAATGG                               >  1:345568/1‑120                                                CATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTGGCCCATCTGCCGCAATGG                               <  2:345568/120‑1                                                                                                                                                                                                      GAACGCGATGCTGCAGCGCCTGGACGATGCCTTCCAGCGCCTGTCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2464981‑2464934 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcATCGCGTTCATGCTGCTGGCCAGCTCGGCCAACTCTTCGGGCATCTGCGCCACCGGCAGACGGGTGGTGAGGGAGCGCGCTGACACGCTGGCGGCCACCTGGCCCATCTGCCGCAATGGGCGCAGGCCGCTGCGGGCGGCCCAGGCAC  >  NC_002947/2464973‑2465120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.