| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2561071 = | 57 (0.960) | 3 (0.050) | 3/248 | NT | 5.5% | coding (360/786 nt) | PP_2244 | TauE‑like transmembrane protein |
| ? | NC_002947 | 2561107 = | 47 (0.820) | coding (324/786 nt) | PP_2244 | TauE‑like transmembrane protein | |||||
CTGGAAGATCACCGGCCTGCTCAGCCTGGGCAGCGTGCCCGCAGCGGCGCTGACCCTGTGGTTCCTCAGCACCCTGCACACCGATACCTCGGCGCTCAACGCCATCATCAAGCAAGGCCTGGCGGTGGTGCTGATCCTGACCGCCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2561221‑2561071‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGCTGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATCTTCCAGTCGATGTTCTTGTTGCGCGCATGCACCCAGAC > NC_002947/2561107‑2561253 CTGGAAGATCACCGGCCTGCTCAGCCTGGGCAGCGTGCCCGCAGCGGCGCTGACCCTGTGGTTCCTCAGCACCCTGCACACCGATACCTCGGCGCTCAACGCCATCATCAAGCAAGGCCTGGCGGTGGTGCTGATCCTGACCGCCCTGG > 2:304318/1‑149 ATCAAGCAAGGCCTGGCGGTGGTGCTGATCCTGACCGCCCTGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGCTGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGG > 7:31459/1‑149 AAGGCCTGGCGGTGGTGCTGATCCTGACCGCCCTGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGCTGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATC > 5:376629/1‑147 AAGGCCTGGCGGTGGTGCTGATCCTGACCGCCCTGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGCTGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATC < 6:376629/147‑1 CCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGCTGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATCTTCCAGTCGATGTTCTTGTTGCGCGCATGCACCCAGAC < 8:31459/149‑1 CTGGAAGATCACCGGCCTGCTCAGCCTGGGCAGCGTGCCCGCAGCGGCGCTGACCCTGTGGTTCCTCAGCACCCTGCACACCGATACCTCGGCGCTCAACGCCATCATCAAGCAAGGCCTGGCGGTGGTGCTGATCCTGACCGCCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2561221‑2561071‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGCTGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATCTTCCAGTCGATGTTCTTGTTGCGCGCATGCACCCAGAC > NC_002947/2561107‑2561253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |