New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2561071 =	57 (0.960)	3 (0.050)	3/248	NT	5.5%	coding (360/786 nt)	PP_2244	TauE‑like transmembrane protein
	?	NC_002947	2561107 =	47 (0.820)					coding (324/786 nt)	PP_2244	TauE‑like transmembrane protein

GCCAGCACCGATGGAGGTGAGGGTGACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATCTTC  >  NC_002947/2560924‑2561218                                                                                                                                                    |                                                                                                                                                     gtctgggtgcatgcgcgcaacaagaacatcgactggaagatcaccggcctgctcagcctgggcagcgtgcccgcagcggcgctgaccctgtggttcctcagcaccctgcacaccgatacctcggcgctcaacgccatcatcaagcaagg                                                                                                                                                     <  8:31459‑M1/2‑1 (MQ=255)     gCACCGATGGAGGTGAGGGTGACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAg                                                                                                                                                 <  1:3295/149‑1 (MQ=255)       aCCGATGGAGGTGAGGGTGACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAggg                                                                                                                                               >  5:161247/1‑149 (MQ=255)               aGGTGAGGGTGACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAgg                                                                                                                                       <  3:83442/149‑1 (MQ=255)               aGGTGAGGGTGACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAgg                                                                                                                                       <  3:200413/149‑1 (MQ=255)                  tGAGGGTGACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATc                                                                                                                                    <  3:74043/149‑1 (MQ=255)                       gTGACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGcac                                                                                                                               >  2:239753/1‑149 (MQ=255)                         gACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGAt                                                                                                                                     <  4:251980/141‑1 (MQ=255)                         gACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGAt                                                                                                                                     >  3:251980/1‑141 (MQ=255)                          aCCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGcaccac                                                                                                                            >  7:52367/1‑149 (MQ=255)                            cATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCg                                                                                                                          >  8:97718/1‑149 (MQ=255)                                   ccAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGc                                                                                                                    <  2:88584/148‑1 (MQ=255)                                    cAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCct                                                                                                                  >  4:74426/1‑149 (MQ=255)                                    cAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCct                                                                                                                  >  5:40838/1‑149 (MQ=255)                                    cAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCct                                                                                                                  >  2:154135/1‑149 (MQ=255)                                       gatcaccggcctgctcagcctgggcagcgtgcccgcagcggcgctgaccctgtggttcctcagcaccctgcacaccgatacctcggcgctcaacgccatcatcaagcaaGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCctt                                                                                                                 >  5:376629‑M1/110‑147 (MQ=255)                                       gatcaccggcctgctcagcctgggcagcgtgcccgcagcggcgctgaccctgtggttcctcagcaccctgcacaccgatacctcggcgctcaacgccatcatcaagcaaGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCctt                                                                                                                 <  6:376629‑M1/38‑1 (MQ=255)                                         accacGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCcttgctt                                                                                                             >  8:174967/1‑149 (MQ=255)                                         accacGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCcttgctt                                                                                                             <  8:52367/149‑1 (MQ=255)                                         accacGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCcttgctt                                                                                                             >  2:259651/1‑149 (MQ=255)                                           cacGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTtga                                                                                                           >  8:197368/1‑149 (MQ=255)                                           cacGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTtga                                                                                                           <  6:40838/149‑1 (MQ=255)                                            ccggcctgctcagcctgggcagcgtgcccgcagcggcgctgaccctgtggttcctcagcaccctgcacaccgatacctcggcgctcaacgccatcatcaagcaaGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTtgat                                                                                                          >  7:31459‑M1/105‑149 (MQ=255)                                                  gTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGc                                                                                                    >  5:105468/1‑149 (MQ=255)                                                   tCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCg                                                                                                   <  4:65518/149‑1 (MQ=255)                                                     aGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGtt                                                                                                 <  8:101728/149‑1 (MQ=255)                                                      gCACTGTGATGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTg                                                                                                <  6:267312/149‑1 (MQ=255)                                                       cACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGa                                                                                               <  7:102212/149‑1 (MQ=255)                                                        aCTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAg                                                                                              <  7:197368/149‑1 (MQ=255)                                                                    ttCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCgg                                                                                                  >  5:310941/1‑132 (MQ=255)                                                                    ttCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGt                                                                                                  <  6:310941/133‑1 (MQ=255)                                                                      cAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCg                                                                                 <  1:154135/148‑1 (MQ=255)                                                                           tGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGtgtg                                                                            >  6:316768/1‑148 (MQ=255)                                                                                  gCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTg                                                                     <  6:105468/148‑1 (MQ=255)                                                                                    tGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑t                                                                  >  6:319974/1‑148 (MQ=255)                                                                                      aGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGTGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGa                                                                <  6:161247/148‑1 (MQ=255)                                                                                           aTAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAAc                                                           <  7:174967/148‑1 (MQ=255)                                                                                              gTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACcac                                                        <  7:75462/148‑1 (MQ=255)                                                                                                  tCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGt                                                   >  1:304318/1‑149 (MQ=255)                                                                                                   cACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGt                                                   >  8:352625/1‑148 (MQ=255)                                                                                                    aCCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGgtgt                                                                             >  1:279769/1‑122 (MQ=255)                                                                                                    aCCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGgtgt                                                                             <  2:279769/122‑1 (MQ=255)                                                                                                     ccGGCATGGTGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAg                                                >  6:197637/1‑149 (MQ=255)                                                                                                        gCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGa                                                                                                                                      <  2:23811/61‑1 (MQ=255)                                                                                                        gCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGa                                                                                                                                      >  1:23811/1‑61 (MQ=255)                                                                                                          aTGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGcgccg                                           <  7:283580/149‑1 (MQ=255)                                                                                                                gcTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCg                                      <  5:197637/148‑1 (MQ=255)                                                                                                                    gCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAg                                                      >  8:96443/1‑128 (MQ=255)                                                                                                                    gCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAg                                                      <  7:96443/128‑1 (MQ=255)                                                                                                                      gAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGgt                                                                               <  7:299926/102‑1 (MQ=255)                                                                                                                      gAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGgt                                                                               >  8:299926/1‑102 (MQ=255)                                                                                                                         ggCCTGCAGGCGCGCTTTGAACCGGATGGCCAGGGCGGTCAGGATCACCACCACCGCCACGCCGTGCTTGATGATGGCGTTGAGCGCCGATGTATCGGTGTGCAGGGTGCTTGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTg                             <  1:259651/149‑1 (MQ=255)                                                                                                                               cAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCcttgc                                                                                                               <  7:82470/61‑1 (MQ=255)                                                                                                                               cAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCcttgc                                                                                                               >  8:82470/1‑61 (MQ=255)                                                                                                                                  gcgcGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGa                   <  1:239753/149‑1 (MQ=255)                                                                                                                                  gcgcGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTAGCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCt                     >  5:72651/1‑147 (MQ=255)                                                                                                                                   cgcgATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAg                  <  6:72651/149‑1 (MQ=255)                                                                                                                                     cgATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCa                <  3:74426/149‑1 (MQ=255)                                                                                                                                       aTTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAgg              >  5:170083/1‑149 (MQ=255)                                                                                                                                          tGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCg           >  8:128402/1‑149 (MQ=255)                                                                                                                                             aCAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGt         >  7:46618/1‑148 (MQ=255)                                                                                                                                              ctggATGGCCAGGGCGGTCAGGATCATCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAg                                                <  6:313201/106‑1 (MQ=255)                                                                                                                                                ggATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATc     <  5:319974/149‑1 (MQ=255)                                                                                                                                                   tGGCCAGGGCGGGCAGGATCAGCACCACCGCCAGGCCTTACTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATCTTc  <  3:307311/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GCCAGCACCGATGGAGGTGAGGGTGACCATTATTCCAAGCACCACGCCGGTCAGCACTGTGAGGATGTTCAGGCTGCGGTCGCTGAGGTGATAGTGATCACCGGCATGGCGGCTGGCGAAGGCCTGCAGGCGCGATTTGAACAGGATGGCCAGGGCGGTCAGGATCAGCACCACCGCCAGGCCTTGCTTGATGATGGCGTTGAGCGCCGAGGTATCGGTGTGCAGGGTGC‑TGAGGAACCACAGGGTCAGCGCCGCTGCGGGCACGCTGCCCAGGCTGAGCAGGCCGGTGATCTTC  >  NC_002947/2560924‑2561218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.