| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2942041 | 56 (0.950) | 4 (0.070) | 4/242 | NT | 7.1% | coding (159/474 nt) | PP_2575 | hypothetical protein |
| ? | NC_002947 | = 2942061 | 51 (0.910) | coding (139/474 nt) | PP_2575 | hypothetical protein | |||||
ACCCACCCGGTCATACAACTCGTCATGCTGGTTGCCGCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGACGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2941918‑2942041‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccACCAATGCCGCAAACGGCACGGCGACGTCCAGCGACCCCCATGTCGGTGGCCGGGTTCGCGGTGCAGCTGCGGGTGCCGCCGCCGGTGCTGTAGGCGCGCAGGTGCGCGGCAACCAGCATGACGAGTTGTATGACCGGGTGGGTGAC < NC_002947/2942061‑2941915 ACCCACCCGGTCATACAACTCGTCATGCTGGTTGCCGCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGAC < 3:170192/118‑1ACCCACCCGGTCATACAACTCGTCATGCTGGTTGCCGCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGAC > 4:170192/1‑118 AACTCGTCATGCTGGTTGCCGCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGACGTCGCCACCAATGCCGCAAACGGCACGGCGACGTCC > 7:270319/1‑138 AACTCGTCATGCTGGTTGCCGCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGACGTCGCCACCAATGCCGCAAACGGCACGGCGACGTCC < 8:270319/138‑1 CGCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGACGTCGCCACCAATGCCGCAAACGGCACGGCGACGTC > 1:110558/1‑118 CGCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGACGTCGCCACCAATGCCGCAAACGGCACGGCGACGTC < 2:110558/118‑1 GCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGAC < 3:179635/82‑1 GCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGAC > 4:179635/1‑82 GTCGCCACCAATGCCGCAAACGGCACGGCGACGTCCAGCGACCCCCATGTCGGTGGCCGGGTTCGCGGTGCAGCTGCGGGTGCCGCCGCCGGTGCTGTAGGCGCGCAGGTGCGCGGCAACCAGCATGACGAGTTGTATGACCGGGTGGG > 2:265491/1‑149 GTCGCCACCAATGCCGCAAACGGCACGGCGACGTCCAGCGACCCCCATGTCGGTGGCCGGGTTCGCGGTGCAGCTGCGGGTGCCGCCGCCGGTGCTGTAGGCGCGCAGGTGCGCGGCAACCAGCATGACGAGTTGTATGACCGGGTGGG > 4:109572/1‑149 GCCACCAATGCCGCAAACGGCACGGCGACGTCCAGCGACCCCCATGTCGGTGGCCGGGTTCGCGGTGCAGCTGCGGGTGCCGCCGCCGGTGCTGTAGGCGCGCAGGTGCGCGGCAACCAGCATGACGAGTTGTATGACCGGGTGGGTGA < 2:194225/149‑1 GCCACCAATGCCGCAAACGGCACGGCGACGTCCAGCGACCCCCATGTCGGTGGCCGGGTTCGCGGTGCAGCTGCGGGTGCCGCCGCCG < 3:194180/88‑1 GCCACCAATGCCGCAAACGGCACGGCGACGTCCAGCGACCCCCATGTCGGTGGCCGGGTTCGCGGTGCAGCTGCGGGTGCCGCCGCCG > 4:194180/1‑88 CCACCAATGCCGCAAACGGCACGGCGACGTCCAGCGACCCCCATGTCGGTGGCCGGGTTCGCGGTGCAGCTGCGGGTGCCGCCGCCGGTGCTGTAGGCGCGCAGGTGCGCGGCAACCAGCATGACGAGTTGTATGACCGGGTGGGTGAC > 7:74451/1‑149 ACCCACCCGGTCATACAACTCGTCATGCTGGTTGCCGCGCACCTGCGCGCCTACAGCACCGGCGGCGGCACCCGCAGCTGCACCGCGAACCCGGCCACCGACATGGGGGTCGCTGGACGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2941918‑2942041‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccACCAATGCCGCAAACGGCACGGCGACGTCCAGCGACCCCCATGTCGGTGGCCGGGTTCGCGGTGCAGCTGCGGGTGCCGCCGCCGGTGCTGTAGGCGCGCAGGTGCGCGGCAACCAGCATGACGAGTTGTATGACCGGGTGGGTGAC < NC_002947/2942061‑2941915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |