| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2973220 = | 59 (1.000) | 5 (0.090) | 5/242 | NT | 8.6% | coding (654/1713 nt) | PP_2600 | hypothetical protein |
| ? | NC_002947 | 2973289 = | 51 (0.910) | coding (585/1713 nt) | PP_2600 | hypothetical protein | |||||
ATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCTTTGGCCGCCACCTGTACCACC‑TGGCCCGCCATGGTCGGGCCATGCACCTGGTCAACGGTGTGGCACTGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2973372‑2973220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcg‑GCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGC > NC_002947/2973289‑2973431 ATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCTTTGGCCGCCACCTGTACCACC‑TGGCCCGCCATGGTCGGGCCATGCACCTGGTCAACGGTGTGGCACTGGT < 2:339591/149‑1 GCGCTTTGGCCGCCACCTGTACCACCGTGGCCCGCCATGGTCGGGCCATGCACCTGGTCAACGGTGTGGCACTGGTGGCGCGCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGT > 1:198503/1‑149 CCGCCACCTGTACCACC‑TGGCCCGCCATGGTCGGGCCATGCACCTGGTCAACGGTGTGGCACTGGTGGCG‑GCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGC > 6:136428/1‑148 CGCCACCTGTACCACC‑TGGCCCGCCATGGTCGGGCCATGCACCTGGTCAACGGTGTGGCACTGGTGGCG‑GCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCA > 2:194478/1‑149 CCGCCATGGTCGGGCCATGCACCTGGTCAACGGTGTGGCACTGGTGGCG‑GCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAAC < 1:194478/149‑1 CCATGGTCGGGCCATGCACCTGGTCAACGGTGTGGCACTGGTGGCGCGCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGA < 2:198503/149‑1 GTGGCG‑GCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGC > 3:23615/1‑149 G‑GCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAA < 7:189880/127‑1 G‑GCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAA > 8:189880/1‑127 ATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCTTTGGCCGCCACCTGTACCACC‑TGGCCCGCCATGGTCGGGCCATGCACCTGGTCAACGGTGTGGCACTGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2973372‑2973220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcg‑GCCAAAGCGCTTGCACACGTGCAGCAGGGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGC > NC_002947/2973289‑2973431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |