| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3176221 | 46 (0.780) | 3 (0.050) | 3/240 | NT | 5.3% | coding (1522/2610 nt) | PP_2787 | transporter |
| ? | NC_002947 | = 3176271 | 64 (1.160) | coding (1572/2610 nt) | PP_2787 | transporter | |||||
CCACTATCTGGTGGTGTTCTGTGCCTGGCTGATTCGCTGGCGCAAGCCGGTATTGCTGGTGACCCTTCCGTTGTTGGCGATGATGACGGTGTTCACGTTCAAGGTGGATATCGAAGACTCGGGCATTGCCTACTTCAAGAAGGACAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3176070‑3176221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcccggCGATGTACCGGCGACTCCGGCCCGGTTGATGAACTCGTCGGACATCCGCACCGGGCTG < NC_002947/3176271‑3176214 CCACTATCTGGTGGTGTTCTGTGCCTGGCTGATTCGCTGGCGCAAGCCGGTATTGCTGGTGACCCTTCCGTTGTTGGCGATGATGACGGTGTTCACGTTCAAGGTGGATATCGAAGACTCGGGCATTGCCTACTTCAAGAAGGACAGCa > 7:187326/1‑148CCACTATCTGGTGGTGTTCTGTGCCTGGCTGATTCGCTGGCGCAAGCCGGTATTGCTGGTGACCCTTCCGTTGTTGGCGATGATGACGGTGTTCACGTTCAAGGTGGATATCGAAGACTCGGGCATTGCCTACTTCAAGAAGGACAGC < 3:18497/148‑1 CTATCTGGTGGTGTTCTGTGCCTGGCTGATTCGCTGGCGCAAGCCGGTATTGCTGGTGACCCTTCCGTTGTTGGCGATGATGACGGTGTTCACGTTCAAGGTGGATATCGAAGACTCGGGCATTGCCTACTTCAAGAAGGACAGCCCGG > 7:292062/1‑149 ACCCTTCCGTTGTTGGCGATGATGACGGTGTTCACGTTCAAGGTGGATATCGAAGACTCGGGCATTGCCTACTTCAAGAAGGACAGCCCGGCGATGTACCGGCGACTCCGGCCCGGTTGATGAACTCGTCGGACATCCGCACCGGGCT < 2:311653/148‑1 CCTTCCGTTGTTGGCGATGATGACGGTGTTCACGTTCAAGGTGGATATCGAAGACTCGGGCATTGCCTACTTCAAGAAGGACAGCCCGGCGATGTACCGGCGACTCCGGCCCGGTTGATGAACTCGTCGGACATCCGCACCGGGCTG < 3:147052/147‑1 CCTTCCGTTGTTGGCGATGATGACGGTGTTCACGTTCAAGGTGGATATCGAAGACTCGGGCATTGCCTACTTCAAGAAGGACAGCCCGGCGATGTACCGGCGACTCCGGCCCGGTTGATGAACTCGTCGGACATCCGCACCGGGCTG > 4:147052/1‑147 CCACTATCTGGTGGTGTTCTGTGCCTGGCTGATTCGCTGGCGCAAGCCGGTATTGCTGGTGACCCTTCCGTTGTTGGCGATGATGACGGTGTTCACGTTCAAGGTGGATATCGAAGACTCGGGCATTGCCTACTTCAAGAAGGACAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3176070‑3176221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcccggCGATGTACCGGCGACTCCGGCCCGGTTGATGAACTCGTCGGACATCCGCACCGGGCTG < NC_002947/3176271‑3176214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |