New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3339138	34 (0.580)	3 (0.060)	3/212	NT	8.6%	intergenic (‑140/+103)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
	?	NC_002947	= 3339182	36 (0.740)					intergenic (‑184/+59)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase

GGCGGGGGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3338972‑3339138 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcttcgcgggcttgcccgctcCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGC  <  NC_002947/3339182‑3339041                                                                                                                                                                                                                                                                                                                       GGCGGGGGCTGGGTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCT                                                                                                                                                                  <  8:325670/149‑1     GGGGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGC                                                                                                                                                              <  6:10505/149‑1                TTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCG                                                                                                                                                   >  4:86954/1‑149                      GGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCAAGCCCGCgaaga                                                                                                                                             <  4:188940/149‑6                                                        GTGGTCCCATCATGGCCGTTGCGCGAAGG‑AAAGACAGCAGGCTAACGAATTAATCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCC                                                                                                          >  2:67457/1‑149                                                                      GCCGTTGCGCGAAGG‑AAAGACAGCAGGCTAACGAATTAATCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGC                                                                                            <  1:67457/149‑1                                                                              GCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCG                                                                                     >  3:372647/1‑149                                                                                                                                                   gCTTCGCGGGCTTGCCCGCGCCCACCGGCACCGCACAGTTATTGGCCGCTTGGGGGGCCTTGGGAGAGGGGCCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTC                <  1:241123/148‑1                                                                                                                                                       CGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCC               <  3:252463/146‑1                                                                                                                                                       CGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCC               <  3:68367/146‑1                                                                                                                                                              TTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAAC     >  1:91254/1‑149                                                                                                                                                                 CCCGCTCCCACCGGGCCCCAACTGTTATTGGACGCTGGTGGGGCCTTGGTAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGG   <  3:61400/148‑1                                                                                                                                                                 CCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGC  >  5:223613/1‑149                                                                                                                                                                                                                                                                                                                       GGCGGGGGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3338972‑3339138 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcttcgcgggcttgcccgctcCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGC  <  NC_002947/3339182‑3339041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.