| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3457714 = | 47 (0.800) | 3 (0.050) | 3/244 | NT | 6.0% | coding (977/1392 nt) | bhbP | D‑beta‑hydroxybutyrate permease |
| ? | NC_002947 | 3457752 = | 50 (0.890) | coding (939/1392 nt) | bhbP | D‑beta‑hydroxybutyrate permease | |||||
ACCAAGCTGACGGCCATCTGGGCTGTGCAGGCCGCGTTGCTGGTGGGCATCCTGATGGTCCTGGTGTGCGCCTTTGGCGCCATTCGTACACGCCTGGCCGAAGGCACCAAAAGCGCGGTGGGTGGTGCCTTGCTGGCAGCCATGAACACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3457865‑3457714‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCAGCTTGGTCACGTCGCTTTGTACCGGTGCACTCATGCCTG > NC_002947/3457752‑3457897 ACCAAGCTGACGGCCATCTGGGCTGTGCAGGCCGCGTTGCTGGTGGGCATCCTGATGGTCCTGGTGTGCGCCTTTGGCGCCATTCGTACACGCCTGGCCGAAGGCACCAAAAGCGCGGTGGGTGGTGCCTTGCTGGCAGCCATGAACAC < 8:249463/149‑1 AGCGCGGTGGGTGGTGCCTTGCTGGCAGCCATGAACACCGCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCAG > 5:161700/1‑149 GCGGTGGGTGGTGCCTTGCTGGCAGCCATGAACACCGCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCA > 3:332011/1‑145 GCGGTGGGTGGTGCCTTGCTGGCAGCCATGAACACCGCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCA < 4:332011/145‑1 CCGCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCAGCTTGGTCACGTCGCTTTGTACCGGTGCACTCA < 1:127059/144‑1 CCGCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCAGCTTGGTCACGTCGCTTTGTACCGGTGCACTCA > 2:127059/1‑144 CGCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCGAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCAGCTTGGTCACGTCGCTTTGTACCGGTGCACTCATGCCTG < 1:315264/149‑1 CGCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCAGCTTGGTCACGTCGCTTTGTACCGGTGCACTCATGCCTG > 2:173039/1‑149 GCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCAC > 3:114600/1‑74 GCGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCAC < 4:114600/74‑1 ACCAAGCTGACGGCCATCTGGGCTGTGCAGGCCGCGTTGCTGGTGGGCATCCTGATGGTCCTGGTGTGCGCCTTTGGCGCCATTCGTACACGCCTGGCCGAAGGCACCAAAAGCGCGGTGGGTGGTGCCTTGCTGGCAGCCATGAACACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3457865‑3457714‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcGCTTTTGGTGCCTTCGGCCAGGCGTGTACGAATGGCGCCAAAGGCGCACACCAGGACCATCAGGATGCCCACCAGCAACGCGGCCTGCACAGCCCAGATGGCCGTCAGCTTGGTCACGTCGCTTTGTACCGGTGCACTCATGCCTG > NC_002947/3457752‑3457897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |