| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3511146 | 56 (0.950) | 5 (0.090) | 4/244 | NT | 8.7% | coding (342/522 nt) | PP_3107 | hypothetical protein |
| ? | NC_002947 | = 3511194 | 52 (0.920) | coding (390/522 nt) | PP_3107 | hypothetical protein | |||||
GAAGCGCTGCAGGCCTATGTCGATCGCCAGGTCAAGCTGCTCACCTCCAAGCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3510997‑3511146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGCCCTGGTTCATGTAATAGGCGTCGATCTGGATGCCGGCAATGGGTGCGGTAACCGAGAGCGTGACGGCCTTGTTGCCCATGCGGGTGTAGCCGCGCAGC < NC_002947/3511194‑3511047 GAAGCGCTGCAGGCCTATGTCGATCGCCAGGTCAAGCTGCTCACCTCCAAGCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGG > 4:249168/1‑149GAAGCGCTGCAGGCCTATGTCGATCGCCAGGTCAAGCTGCTCACCTCCAAGCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGG > 5:98223/1‑149 GCTGCAGGCCTATGTCGATCGCCAGGTCAAGCTGCTCACCTCCAAGCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCACGC > 4:375488/1‑149 TCAAGCTGCTCACCTCCAAGCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCACGCCCGGGGCTGATGATGAAGGCGGCCTG > 6:278874/1‑149 CTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGC < 1:357219/149‑1 GGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGCCCTGGT < 1:148471/149‑1 GGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGCCCTGGT < 3:375488/149‑1 CACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGCCCTGGTTCAT < 5:278874/148‑1 CAGGGCACGCCCGTGGCTGATGATGAAGGCGGCCTGGCGCTGGTTCAGCGGGCGGCCCTGGTTCATGTAATAGGCGTCGATCTGGATGCCGGCAATGGGTGCGGTAACCGAGAGCGTGACGGCCTTGTTGCCCATGCGGGTGTAGCCG < 7:245161/148‑1 AGGGCACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGCCCTGGTTCATGTAATAGGCGTCGATCTGGATGCCGGCAATGGGTGCGGTAACCGAGAGCGTGACGGCCTTGTTGCCCATGCGGGTGTAGCCGC < 5:320897/148‑1 AGGGCACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGCCCTGGTTCATGTAATAGGCGTCGATCTGGATGCCGGCAATGGGTGCGGTAACCGAGAGCGTGACGACCTTGTTGCCCATGCGGGTGTAGCCGC < 1:204717/148‑1 CACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGCCCTGGTTCATGTAATAGGCGCCGATCTGGATGCCGGCAATGGGTGCGGTAACCGAGAGCGTGACGGCCTTGTTGCCCATGCGGGTGTAGCCGCGCAGC < 1:282139/149‑1 GAAGCGCTGCAGGCCTATGTCGATCGCCAGGTCAAGCTGCTCACCTCCAAGCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3510997‑3511146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcACGCCCGGGGCTGATGATGAAGGCGGCCTGGCGCTGGTACAGCGGGCGGCCCTGGTTCATGTAATAGGCGTCGATCTGGATGCCGGCAATGGGTGCGGTAACCGAGAGCGTGACGGCCTTGTTGCCCATGCGGGTGTAGCCGCGCAGC < NC_002947/3511194‑3511047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |