New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 351114656 (0.950)5 (0.090) 4/244 NT 8.7% coding (342/522 nt) PP_3107 hypothetical protein
?NC_002947 = 3511194 52 (0.920)coding (390/522 nt) PP_3107 hypothetical protein

GCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAGCGCCGAGTCCGGCGAACAGGAGTAACCCCTCATGTTCG  >  NC_002947/3511047‑3511339
                                                                                                                                                   |                                                                                                                                                 
gCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGGCGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTg                                                                                                                                                  <  1:282139‑M2/149‑2 (MQ=255)
     gcgGCTACACCCGCATGGGCAACAAGGTCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTgccct                                                                                                                                              <  1:204717‑M2/148‑6 (MQ=255)
     gcgGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTgccct                                                                                                                                              <  5:320897‑M2/148‑6 (MQ=255)
      cgGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGAACCAGCGCCAGGCCGCCTTCATCATCAGCCACGGGCGTgccctg                                                                                                                                             <  7:245161‑M2/148‑7 (MQ=255)
            cacCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGAtcttc                                                                                                                                       <  7:203605/148‑1 (MQ=255)
             acCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTtctc                                                                                                                                     <  5:32134/149‑1 (MQ=255)
             acCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTtctc                                                                                                                                     <  1:20625/149‑1 (MQ=255)
             acCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTtctc                                                                                                                                     >  6:389889/1‑149 (MQ=255)
             acCCGCATGGGCAACAAGGCCGGCACGCGCTCGGTTACCGCACCCCTTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTtctc                                                                                                                                     <  8:287569/149‑1 (MQ=255)
               ccGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATGAGCCCCGGGCGTGCCCTGATCTTCTcca                                                                                                                                   <  1:213473/149‑1 (MQ=255)
                  cATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTccacca                                                                                                                                <  5:389889/149‑1 (MQ=255)
                            aaGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGc                                                                                                                      <  2:102877/149‑1 (MQ=255)
                            aaGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGc                                                                                                                      <  7:290811/149‑1 (MQ=255)
                                ccGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGAc                                                                                                                  <  3:230872/149‑1 (MQ=255)
                                      cGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGt                                                                                                            <  1:342615/149‑1 (MQ=255)
                                        ctctCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGc                                                                                                          <  3:249168/149‑1 (MQ=255)
                                           tcGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCca                                                                                                       <  2:144301/149‑1 (MQ=255)
                                             ggTTACCGCACCCATTGCCGGCATCCAGATCGGCGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCcagc                                                                                                     <  2:282139/149‑1 (MQ=255)
                                             ggTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGCGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGccc                                                                                                        <  8:121554/146‑1 (MQ=255)
                                              gTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCcag                                                                                                      >  5:95271/1‑147 (MQ=255)
                                                   cGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAAcc                                                                                               <  2:204717/149‑1 (MQ=255)
                                                          aTTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTg                                                                                        <  8:103663/149‑1 (MQ=255)
                                                            tGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTgg                                                                                       >  7:125339/1‑148 (MQ=255)
                                                               cGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACa                                                                                   <  6:320897/149‑1 (MQ=255)
                                                                     ccAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCCTCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACCACCTGt                                                                             >  2:207729/1‑149 (MQ=255)
                                                                     ccAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAAc                                                                                                >  3:305365/1‑130 (MQ=255)
                                                                     ccAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAAc                                                                                                <  4:305365/130‑1 (MQ=255)
                                                                     ccAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGAc                                                                                          <  6:387711/136‑1 (MQ=255)
                                                                     ccAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGAc                                                                                          >  5:387711/1‑136 (MQ=255)
                                                                       aGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTg                                                                           <  6:95271/149‑1 (MQ=255)
                                                                         aTCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTACATCATCAGCCCCGGGCGTGCCCTGATCTTCACCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGc                                                                         >  6:274726/1‑149 (MQ=255)
                                                                               gCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCtt                                                                   >  3:62450/1‑149 (MQ=255)
                                                                                    ttACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCAccc                                                              >  8:167952/1‑149 (MQ=255)
                                                                                      aCATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCcg                                                            >  5:74361/1‑149 (MQ=255)
                                                                                       cATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTg                                                                           >  8:180903/1‑133 (MQ=255)
                                                                                       cATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTg                                                                           <  7:180903/133‑1 (MQ=255)
                                                                                       cATGAACCACGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCcgc                                                           <  8:245161/149‑1 (MQ=255)
                                                                                        aTGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTgccctggttcatgtaataggcgtcgatctggatgccggcaatgggtgcggtaaccgagagcgtgacggccttgttgcccatgcgggtg                                                           <  5:278874‑M2/148‑89 (MQ=255)
                                                                                        aTGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTg                                                                           <  2:249473/132‑1 (MQ=255)
                                                                                        aTGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTg                                                                           >  1:249473/1‑132 (MQ=255)
                                                                                        aTGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCAGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGAATGGGCCAACCTGTTGGCCAGCTTCACCCcgcg                                                          >  3:65468/1‑149 (MQ=255)
                                                                                          gAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGATGGCCAGCTTCACCCCGCGTg                                                        >  3:61120/1‑149 (MQ=255)
                                                                                            aCCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTgccctggttcatgtaataggcgtcgatctggatgccggcaatgggtgcggtaaccgagagcgtgacggccttgttgcccatgcgggtgtagcc                                                      <  1:148471‑M2/149‑94 (MQ=255)
                                                                                            aCCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTgccctggttcatgtaataggcgtcgatctggatgccggcaatgggtgcggtaaccgagagcgtgacggccttgttgcccatgcgggtgtagcc                                                      <  3:375488‑M2/149‑94 (MQ=255)
                                                                                             ccAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGccc                                                     >  3:9921/1‑149 (MQ=255)
                                                                                                  gccgccCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTgccctggttcatgtaataggcgtcgatctggatgccggcaatgggtgcggtaaccgagagcgtgacggccttgttgcccatgcgggtgtagccgcgcag                                                <  1:357219‑M2/149‑100 (MQ=255)
                                                                                                           tGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAgc                                       >  4:80659/1‑149 (MQ=255)
                                                                                                             tACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAgcgc                                     >  3:195677/1‑149 (MQ=255)
                                                                                                               ccAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAGCGcc                                    >  8:54146/1‑148 (MQ=255)
                                                                                                                cAGCGCTAGTCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCTCTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGTCAACCTGTTGTCCAGCTTCTCCCCGCGTGCCCCGTCCGAATCCAGCGCCGa                                  <  4:218040/149‑1 (MQ=255)
                                                                                                                      cAGGCCGCCTTCATCATCAGCCCCGGGCGTgccctggttcatgtaataggcgtcgatctggatgccggcaatgggtgcggtaaccgagagcgtgacggccttgttgcccatgcgggtgtagccgcgcagcttggaggtgagcagcttga                            >  6:278874‑M2/1‑30 (MQ=255)
                                                                                                                                tcatcatcaGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTg                                                                           >  5:227064/1‑92 (MQ=255)
                                                                                                                                tcatcatcaGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTg                                                                           <  6:227064/92‑1 (MQ=255)
                                                                                                                                 catcatcaGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAGCGCCGAGTCCGGCGAACAGGa                   <  7:167952/147‑1 (MQ=255)
                                                                                                                                 catcatcaGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAGCGCCGAGTCCGGCGAACAGGa                   <  6:74361/147‑1 (MQ=255)
                                                                                                                                 catcatcaGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAGCGCCGAGTCCGGCGAACAGGa                   <  8:125339/147‑1 (MQ=255)
                                                                                                                                        aGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAgc                                       >  6:280501/1‑120 (MQ=255)
                                                                                                                                        aGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAgc                                       <  5:280501/120‑1 (MQ=255)
                                                                                                                                         gCCCCGGCCGTGCCCTGATCTTCTCCACCACTGCACAGGCAGACTTCAGTGCCCAGCAGAACCAGTACTGGGACAACCTGATGGCCAGCTTCACCCCGCGTGCCCCGACCGAAACCAGCGCCGAGTCCGGCGAACAGGAGTAAcccca          >  2:342268/1‑147 (MQ=255)
                                                                                                                                            ccGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAgcg                                      <  4:209790/117‑1 (MQ=255)
                                                                                                                                            ccGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAgcg                                      >  3:209790/1‑117 (MQ=255)
                                                                                                                                                gCGTgccctggttcatgtaataggcgtcgatctggatgccggcaatgggtgcggtaaccgagagcgtgacggccttgttgcccatgcgggtgtagccgcgcagcttggaggtgagcagcttgacctggcgatcgacataggcctgcagc  >  4:375488‑M2/1‑4 (MQ=255)
                                                                                                                                                  gTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAGCGCCGAGTCCGGCGAACAGGAGTAACCCCTCATGTTCg  >  1:169828/1‑147 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
GCTGCGCGGCTACACCCGCATGGGCAACAAGGCCGTCACGCTCTCGGTTACCGCACCCATTGCCGGCATCCAGATCGACGCCTATTACATGAACCAGGGCCGCCCGCTGTACCAGCGCCAGGCCGCCTTCATCATCAGCCCCGGGCGTGCCCTGATCTTCTCCACCACTGCACAGGCCGACTTCAGTGCCCAGCAGAACCAGGACTGGGACAACCTGTTGGCCAGCTTCACCCCGCGTGCCCCGTCCGAAACCAGCGCCGAGTCCGGCGAACAGGAGTAACCCCTCATGTTCG  >  NC_002947/3511047‑3511339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.