New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3915087 = | 51 (0.860) | 9 (0.160) | 8/244 | NT | 15.2% | coding (56/1176 nt) | PP_3455 | multidrug RND transporter membrane fusion protein |
? | NC_002947 | 3915136 = | 52 (0.920) | coding (105/1176 nt) | PP_3455 | multidrug RND transporter membrane fusion protein |
CACGCACTTCGGCGGTGCGTGGCGCGAGGATACGGCCGCTGAGTTCACTGCTGATGGCCAGTGGCTGCAGTTGCAGGGTTTCTACGCGCACTTGCGCGGTGGGGGCCTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3915239‑3915087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaggcCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGAAGTGCGTGCGCGGGTCGCAGGCGTGGTGCTCAAGCGGGTGTACCGCG > NC_002947/3915136‑3915278 CACGCACTTCGGCGGTGCGTGGCGCGAGGATACGGCCGCTGAGTTCACTGCTGATGGCCAGTGGCTGCAGTTGCAGGGTTTCTACGCGCACTTGCGCGGTGGGGGCCTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGAC < 6:331002/149‑1 ACGCACTTCGGCGGTGCGTGGCGCGAGGATACGGCCGCTGAGTTCACTGCTGATGGCCAGTGGCTGCAGTTGCAGGGTTTCTACGCGCACTTGCGCGGTGGGGGCCTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACA < 8:311180/149‑1 CGCACTTCGGCGGTGCGTGGCGCGAGGATACGGCCGCTGAGTTCACTGCTGATGGCCAGTGGCTGCAGTTGCAGGGTTTCTACGCGCACTTGCGCGGTGGGGGCCTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAG < 4:118557/149‑1 CCTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGA < 7:216354/144‑1 CCTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGA > 8:216354/1‑144 CTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGAAGTGCG > 2:56529/1‑149 CTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCC < 5:192156/131‑1 CTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCC > 6:192156/1‑131 TTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGAAGTGCGT < 1:56529/147‑1 TCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAGACGAACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGAAGTGCGTGCGC > 5:320850/1‑149 GGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAG > 5:89608/1‑103 GGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAG < 6:89608/103‑1 AGGACCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGAAGTGCGTGCGCGGGTCGCAGGCGTGGTGCTCAAGCGGGTGTACCGCG > 8:281189/1‑147 GGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGAAGTGCGTGCGCGGGTCGCAGGCGTGGTGCTC > 7:196299/1‑130 GGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGAAGTGCGTGCGCGGGTCGCAGGCGTGGTGCTC < 8:196299/130‑1 CACGCACTTCGGCGGTGCGTGGCGCGAGGATACGGCCGCTGAGTTCACTGCTGATGGCCAGTGGCTGCAGTTGCAGGGTTTCTACGCGCACTTGCGCGGTGGGGGCCTGTTCGTCTGGCTCGGCGCTGTCGCTGCAGCCGGCCAG‑‑GGACAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3915239‑3915087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaggcCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCCACGCACCGCCGAAGTGCGTGCGCGGGTCGCAGGCGTGGTGCTCAAGCGGGTGTACCGCG > NC_002947/3915136‑3915278 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |