| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4127468 = | 59 (1.000) | 3 (0.050) | 3/242 | NT | 5.2% | intergenic (‑108/‑164) | opdT‑II/htrG | tyrosine‑specific outer membrane porin D/signal transduction protein |
| ? | NC_002947 | 4127492 = | 54 (0.970) | intergenic (‑132/‑140) | opdT‑II/htrG | tyrosine‑specific outer membrane porin D/signal transduction protein | |||||
TGAAACAGGACAAAAAGTAGGCCAGGTGACTGGGCCGATGAACCGGTCGGTGAGTTGACCGTCAGCGAAAGACCGTTTTTTTGTCAGCAGGTTCACTGCCTAGTGTCGGAAATGTCTGCAGAATGTTGCAGCGCCCGCCCCAGAGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4127618‑4127468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgcAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCTGTTTCAGCGAAGACCCAACATGCCC > NC_002947/4127492‑4127637 TGAAACAGGACAAAAAGTAGGCCAGGTGACTGGGCCGATGAACCGGTCGGTGAGTTGACCGTCAGCGAAAGACCGTTTTTTTGTCAGCAGGTTCACTGCCTAGTGTCGGAAATGTCTGCAGAATGTTGCAGCGCCCGCCCCAGAGCGCT > 6:148922/1‑149 AAACAGGACAAAAAGTAGGCCAGGTGACTGGGCCGATGAACCGGTGGGTGAGTTGACCGTCAGCGAAAGACCGTTTTTTTGTCAGCAGGTTCACTGCCTAGTGTCGGAAATGTCTGCAGAATGTTGAAGAGCCCGCCCCAGAGCGCTGC > 1:268324/1‑149 TCTGCAGAATGTTGCAGCGCCCGCCCCAGAGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACT > 1:182228/1‑149 AGAATGTTGCAGCGCCCGCCCCAGAGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACC < 3:258523/111‑1 AGAATGTTGCAGCGCCCGCCCCAGAGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACC > 4:258523/1‑111 GCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCTGTTTCAGCGAAGACCCAACAT > 7:276323/1‑149 GCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTT > 1:257715/1‑121 GCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTT < 2:257715/121‑1 TGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCTGTTTCAGCGAAGACCCAACATGCCC > 1:358133/1‑149 TGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCTGTTTCAGCGAAGACCCAACATGCCC > 8:233280/1‑149 CAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTAACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTC > 6:68465/1‑120 TGAAACAGGACAAAAAGTAGGCCAGGTGACTGGGCCGATGAACCGGTCGGTGAGTTGACCGTCAGCGAAAGACCGTTTTTTTGTCAGCAGGTTCACTGCCTAGTGTCGGAAATGTCTGCAGAATGTTGCAGCGCCCGCCCCAGAGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4127618‑4127468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgcAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCTGTTTCAGCGAAGACCCAACATGCCC > NC_002947/4127492‑4127637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |