New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4127468 =	59 (1.000)	3 (0.050)	3/242	NT	5.2%	intergenic (‑108/‑164)	opdT‑II/htrG	tyrosine‑specific outer membrane porin D/signal transduction protein
	?	NC_002947	4127492 =	54 (0.970)					intergenic (‑132/‑140)	opdT‑II/htrG	tyrosine‑specific outer membrane porin D/signal transduction protein

CAGGCAAGCAGCCAGTGTCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCTGTTT  >  NC_002947/4127322‑4127616                                                                                                                                                   |                                                                                                                                                       gggcatgttgggtcttcgctgaaacaggacaaaaagtaggccaggtgactgggccgatgaaccggtcggtgagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttGCa                                                                                                                                                      >  8:233280‑M1/147‑149 (MQ=255) gggcatgttgggtcttcgctgaaacaggacaaaaagtaggccaggtgactgggccgatgaaccggtcggtgagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttGCa                                                                                                                                                      >  1:358133‑M1/147‑149 (MQ=255) cAGGCAAGCAGCCAGTGTCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACg                                                                                                                                                        >  7:254549/1‑147 (MQ=255)     atgttgggtcttcgctgaaacaggacaaaaagtaggccaggtgactgggccgatgaaccggtcggtgagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttGCAgcgc                                                                                                                                                  >  7:276323‑M1/143‑149 (MQ=255)      aaGCAGCCAGTGTCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGct                                                                                                                                                 >  6:85410/1‑149 (MQ=255)       agcagcCAGTGTCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGctc                                                                                                                                                <  8:225787/149‑1 (MQ=255)       agcagcCAGTGTCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGctc                                                                                                                                                <  5:284524/149‑1 (MQ=255)               gTGTCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCgg                                                                                                                                        <  5:151828‑M2/148‑1 (MQ=255)               gTGTCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCgg                                                                                                                                        <  2:116306‑M2/148‑1 (MQ=255)                tgtCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGgggcggg                                                                                                                                       >  4:74107/1‑149 (MQ=255)                     ggggTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTg                                                                                                                                  <  4:76360/149‑1 (MQ=255)                      gggTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTg                                                                                                                                  >  6:9248/1‑148 (MQ=255)                            gacaaaaagtaggccaggtgactgggccgatgaaccggtcggttagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttg                                                                                                                                                        >  6:68465‑M1/120‑120 (MQ=255)                             cTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGgcgc                                                                                                                                    >  6:289906/1‑139 (MQ=255)                             cTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGgcgc                                                                                                                                    <  5:289906/139‑1 (MQ=255)                                cACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTc                                                                                                                          <  2:35972/146‑1 (MQ=255)                                cACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCt                                                                                                                         <  6:378639/147‑1 (MQ=255)                                 aaagtaggccaggtgactgggccgatgaaccggtcggtgagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttGCAgcgc                                                                                                                                                  <  2:257715‑M1/7‑1 (MQ=255)                                 aaagtaggccaggtgactgggccgatgaaccggtcggtgagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttGCAgcgc                                                                                                                                                  >  1:257715‑M1/115‑121 (MQ=255)                                 aCGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCa                                                                                                                      <  5:85410/149‑1 (MQ=255)                                   agtaggccaggtgactgggccgatgaaccggtcggtgagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGa                                                                                                                    >  1:182228‑M1/113‑149 (MQ=255)                                    tCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGAGGTCCACGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGAc                                                                                                                   <  8:346797/149‑1 (MQ=255)                                      aTCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACAt                                                                                                                 <  6:47084/149‑1 (MQ=255)                                          gATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTcc                                                                                                             <  7:97562/149‑1 (MQ=255)                                              cTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGaca                                                                                                         <  3:276686/149‑1 (MQ=255)                                                 cTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTa                                                                                                      <  2:365098/149‑1 (MQ=255)                                                 cTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTa                                                                                                      <  8:312749/149‑1 (MQ=255)                                                  ttGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAg                                                                                                     >  3:367771/1‑149 (MQ=255)                                                           gCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAAc                                                                                            <  5:9248/149‑1 (MQ=255)                                                            cATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTATGCAGTGAAcc                                                                                           >  7:179935/1‑149 (MQ=255)                                                             aTTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACct                                                                                          >  6:380650/1‑149 (MQ=255)                                                              tttGTTGTTATGTCGGCGTGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACctg                                                                                         <  7:337634/149‑1 (MQ=255)                                                              tttGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACctg                                                                                         >  5:142565/1‑149 (MQ=255)                                                                 gttgttATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGc                                                                                                   >  6:372990/1‑136 (MQ=255)                                                                 gttgttATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGc                                                                                                   <  5:372990/136‑1 (MQ=255)                                                                    ggtgagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttGCAGCGCTCTGGGGCGGGCGCTGCAACATTCt                                                                                                                         >  4:258523‑M1/80‑111 (MQ=255)                                                                    ggtgagttgaccgtcagcgaaagaccgtttttttgtcagcaggttcactgcctagtgtcggaaatgtctgcagaatgttGCAGCGCTCTGGGGCGGGCGCTGCAACATTCt                                                                                                                         <  3:258523‑M1/32‑1 (MQ=255)                                                                     ttATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACACTTGCGTCAGCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACa                                                                                   >  7:340786/1‑148 (MQ=255)                                                                         gTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACaaaag                                                                               >  1:136080/1‑147 (MQ=255)                                                                         gTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACaa                                                                                  <  2:136080/145‑1 (MQ=255)                                                                          tCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACaaaaaaa                                                                             <  3:74107/149‑1 (MQ=255)                                                                            gccggGCCAAGATTGACGGCCGGCAGATAACGCCAAGTTGATCGGCGCATTAGAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACg                                                                           <  5:333142/147‑1 (MQ=255)                                                                             gcggGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACgg                                                                          >  2:293826/1‑149 (MQ=255)                                                                                  ccAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCttt                                                                     <  5:380650/149‑1 (MQ=255)                                                                                  ccAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCttt                                                                     >  4:181845/1‑149 (MQ=255)                                                                                   cAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATAGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTc                                                                    <  2:30807/149‑1 (MQ=255)                                                                                     aGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑c                                                                >  8:4569/1‑149 (MQ=255)                                                                                      gATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑Ct                                                               <  3:34049/149‑1 (MQ=255)                                                                                      gATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑Ct                                                               <  5:71150/149‑1 (MQ=255)                                                                                      gATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑Ct                                                               <  7:4569/149‑1 (MQ=255)                                                                                         tGACGGACGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTATGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGa                                                             <  8:179935/148‑1 (MQ=255)                                                                                           aCGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTAACgg                                                          >  3:61789/1‑149 (MQ=255)                                                                                               ccggcAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGt                                                         >  8:261619/1‑146 (MQ=255)                                                                                               ccggcAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGt                                                         <  7:261619/146‑1 (MQ=255)                                                                                                     gATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTCACAAAAAAACGGTCTATCG‑‑CTGACGGTCAACTCacc                                                >  3:17815/1‑149 (MQ=255)                                                                                                        aaCGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCaccgac                                             >  2:22835/1‑149 (MQ=255)                                                                                                           gCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCgg                                          >  8:141649/1‑149 (MQ=255)                                                                                                            ccAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGt                                         >  1:23832/1‑149 (MQ=255)                                                                                                                   gATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCgg                                  >  3:120878/1‑149 (MQ=255)                                                                                                                   gATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCgg                                  >  2:268324/1‑149 (MQ=255)                                                                                                                    aTCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGc                                 <  3:181845/149‑1 (MQ=255)                                                                                                                           cATCACAATTGCGTCATCGGCAACGCAGCGCGCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCa                          <  8:254549/149‑1 (MQ=255)                                                                                                                                 aaTTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACctgct                                                                                       >  7:318164/1‑84 (MQ=255)                                                                                                                                 aaTTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACctgct                                                                                       <  8:318164/84‑1 (MQ=255)                                                                                                                                 aaTTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTAACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGc                    <  4:61789/149‑1 (MQ=255)                                                                                                                                        tCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACttt             <  4:120878/149‑1 (MQ=255)                                                                                                                                        tCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACttt             >  6:279799/1‑149 (MQ=255)                                                                                                                                          aTCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACtttt            <  7:141649/148‑1 (MQ=255)                                                                                                                                             ggCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACttt             <  1:361775/144‑1 (MQ=255)                                                                                                                                             ggCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACttt             >  2:361775/1‑144 (MQ=255)                                                                                                                                             ggCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTc        >  5:148922/1‑149 (MQ=255)                                                                                                                                              gCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTcc       >  2:203030/1‑149 (MQ=255)                                                                                                                                               cAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTTCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCGCCCTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTc        <  1:293826/149‑1 (MQ=255)                                                                                                                                               cAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCt      <  2:23832/149‑1 (MQ=255)                                                                                                                                                   GCAGCGCTCTGGGGCGGGCTCTTCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCCACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCTGttt  >  1:268324‑M1/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                       CAGGCAAGCAGCCAGTGTCAGGGGTGATCTGCACGTCATCCGATGCTCCTTGAACGTCGCATTTGTTGTTATGTCGGCGGGCCAAGATTGACGGCCGGCAGATAACGCCAAGGTGATCGGCGCATTACAATTGCGTCATCGGCAACGCAGCGCTCTGGGGCGGGCGCTGCAACATTCTGCAGACATTTCCGACACTAGGCAGTGAACCTGCTGACAAAAAAACGGTCTTTCG‑‑CTGACGGTCAACTCACCGACCGGTTCATCGGCCCAGTCACCTGGCCTACTTTTTGTCCTGTTT  >  NC_002947/4127322‑4127616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.