| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4244718 = | 48 (0.810) | 3 (0.050) | 3/248 | NT | 5.9% | coding (303/1191 nt) | aruH | arginine‑‑pyruvate transaminase AruH |
| ? | NC_002947 | 4244794 = | 49 (0.860) | coding (227/1191 nt) | aruH | arginine‑‑pyruvate transaminase AruH | |||||
TCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGGCCATCGCCAACCGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4244869‑4244718‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGGCGCAGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTCGACGATAGGCGCGGGAGTGTCGAAGTCCGGGTCACCCACCGACAGCAGCAGGATGTCCTTGTCCTCAGC > NC_002947/4244794‑4244936 TCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGGCCATCGCCAACCGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGG < 4:178099/149‑1 CAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGGCCATCGCCAACCGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGGG > 1:86133/1‑134 CAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGGCCATCGCCAACCGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGGG < 2:86133/134‑1 CATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGGCCATCGCCAACCGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGGGCC < 2:325602/120‑1 CCATCGCCAACCGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGGGCCTGGCGCAGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTC > 2:311967/1‑148 CGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGGGCCTGGCGCAGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGAT > 1:373194/1‑128 CGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGGGCCTGGCGCAGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGAT < 2:373194/128‑1 CTGGCGCAGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTCGACGATAGGCGCGGGAGTGTCGAAGTCCGGGTCACCCACCGACAGCAGCAGGATGTCCTTGTCCTCAGC < 5:344849/144‑1 CTGGCGCAGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTCGACGATAGGCGCGGGAGTGTCGAAGTCCGGGTCACCCACCGACAGCAGCAGGATGTCCTTGTCCTCAGC > 6:344849/1‑144 TCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGGCCATCGCCAACCGTCACCGGCAGCGCAGCGGCCAGGCGGTGAGCGCCGACCAGGTGACGGTGCTGGCGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4244869‑4244718‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGGCGCAGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTCGACGATAGGCGCGGGAGTGTCGAAGTCCGGGTCACCCACCGACAGCAGCAGGATGTCCTTGTCCTCAGC > NC_002947/4244794‑4244936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |