| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4537518 = | NA (NA) | 10 (0.180) | 6/246 | NT | 34.2% | coding (853/1533 nt) | PP_4025 | transposase |
| ? | NC_002947 | = 4626625 | 20 (0.340) | coding (879/1533 nt) | PP_4091 | transposase | |||||
CTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑gc‑‑‑tgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4537665‑4537518‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAG < NC_002947/4626625‑4626490 CTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑G < 5:194459/149‑1 TTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC > 7:90203/1‑149 TTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC > 3:123367/1‑149 TTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC > 3:208186/1‑149 TTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC > 6:338985/1‑149 TTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAAAGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC > 8:16328/1‑149 CGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑TG > 6:260389/1‑149 GACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑TGG > 1:58440/1‑149 GACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑TG < 3:350350/148‑1 CATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCCGCGCGCAGGAGGTGCCGCTGCGC‑CT‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTAC < 1:167904/149‑1 ACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑T > 4:299063/1‑118 ACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑T < 3:299063/118‑1 CCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGAACGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTC > 7:242164/1‑149 TCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGC > 5:284875/1‑105 TCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGC < 6:284875/105‑1 CAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GCTGGTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCG > 5:85593/1‑149 GCAG‑GCGCAGCGGCACCTCCTGCGCGCGGCTGC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTC > 6:193609/1‑149 GCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GCTGGTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAACTCGTC > 3:348555/1‑149 GCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCG > 8:234662/1‑147 GCAG‑GCGCAGCGGCACCTCCTGCGC‑CT‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGCCCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTCGAAG > 7:165946/1‑149 CCTCCTGCGCGCG‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAG < 7:234662/149‑1 GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGG < 2:110692/72‑1 GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGG > 1:110692/1‑72 GGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCG < 4:237901/94‑1 GGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCG > 3:237901/1‑94 CTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAG‑GCGCAGCGGCACCTCCTGCGCGCG‑‑‑gc‑‑‑tgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4537665‑4537518‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GC‑‑‑TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAG < NC_002947/4626625‑4626490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |