| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4656534 | 50 (0.850) | 3 (0.050) | 3/248 | NT | 5.4% | coding (350/414 nt) | nuoA | NADH‑quinone oxidoreductase subunit A |
| ? | NC_002947 | = 4656565 | 57 (1.000) | coding (381/414 nt) | nuoA | NADH‑quinone oxidoreductase subunit A | |||||
TCTGGTCGCGATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4656385‑4656534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACCTTCGGGAGCCCAATCAAGTGCCCCGACGCGCCATAGGTAGACAAGACCTGCCAACAGAATTGCTATGAAAACGAGTGCTTCGACGAATCCGGTCCAGCCGCTTTCGCGGACGGACACAGACCATGCAAAGAGAAAGAGGGCTTC < NC_002947/4656565‑4656419 TCTGGTCGCGATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGG < 6:8047/148‑1TCTGGTCGCGATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATG < 2:219089/147‑1 GTCGCGATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGC < 1:149946/145‑1 TTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGACCTTCGGGAGCCCAATCAAGTGCCCCGACGCGCCATAGGTAGACA < 1:29838/147‑1 ATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGTGACCTTCGGGAGCCCAATCAAGTGCCCCGACGCGCCATAGGTA > 1:96583/1‑138 ATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGTGACCTTCGGGAGCCCAATCAAGTGCCCCGACGCGCCATAGGTA < 2:96583/138‑1 GCGACCTTCGGGAGCCCAATCAAGTGCCCCGACGCGCCATAGGTAGACAAGACCTGCCAACAGAATTGCTATGAAAACGAGTGCTTCGACGAATCCGGTCCAGCCGCTTTCGCGGACGGACACAGACCATGCAAAGAGAAAGAGGGCTT < 3:25930/149‑1 GACCTTCGGGAGCCCAATCAAGTGCCCCGACGCGCCATAGGTAGACAAGACCTGCCAACAGAATTGCTATGAAAACGAGTGCTTCGACGAATCCGGTCCAGCCGCTTTCGCGGACGGACACAGACCATGCAAAGAGAAAGAGGGCTTC > 7:227121/1‑148 TCTGGTCGCGATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4656385‑4656534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACCTTCGGGAGCCCAATCAAGTGCCCCGACGCGCCATAGGTAGACAAGACCTGCCAACAGAATTGCTATGAAAACGAGTGCTTCGACGAATCCGGTCCAGCCGCTTTCGCGGACGGACACAGACCATGCAAAGAGAAAGAGGGCTTC < NC_002947/4656565‑4656419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |