New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4656534	50 (0.850)	3 (0.050)	3/248	NT	5.4%	coding (350/414 nt)	nuoA	NADH‑quinone oxidoreductase subunit A
	?	NC_002947	= 4656565	57 (1.000)					coding (381/414 nt)	nuoA	NADH‑quinone oxidoreductase subunit A

GCGATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCCGGTCGGTGAACGGGAAACCGT  >  NC_002947/4656392‑4656681                                                                                                                                               |                                                                                                                                                    gcgATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCgg                                                                                                                                               <  8:330529/149‑1 (MQ=255)   gATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCgggg                                                                                                                                             >  1:5987/1‑149 (MQ=255)          ttCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCg                                                                                                                                                >  4:181388/1‑139 (MQ=255)          ttCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCg                                                                                                                                                <  3:181388/139‑1 (MQ=255)             gTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGAtt                                                                                                                                    <  4:243155/148‑1 (MQ=255)             gTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTg                                                                                                                                   >  8:227121/1‑149 (MQ=255)                aTCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGc                                                                                                                                >  8:66653/1‑149 (MQ=255)                  cTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGCAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTc                                                                                                                              >  2:283098/1‑149 (MQ=255)                   ttCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTcc                                                                                                                             >  4:254341/1‑149 (MQ=255)                       atatCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGaa                                                                                                                         <  7:66653/149‑1 (MQ=255)                        tatCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAg                                                                                                                        <  7:68072/149‑1 (MQ=255)                          tCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGt                                                                                                                      <  1:240761/149‑1 (MQ=255)                            gAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTc                                                                                                                     >  7:227121‑M2/1‑147 (MQ=255)                             aaGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTcgc                                                                                                                   <  3:25930‑M2/149‑4 (MQ=255)                                     tttctctttGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCgcaagcg                                                                                                           >  5:147201/1‑149 (MQ=255)                                          ctttGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCgcaagcggcaag                                                                                                      >  5:304486/1‑149 (MQ=255)                                           ttttCATGGTCTGTGTACGTCCGCGTAAGCGGATGGTCCGGATGCGTAGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCTCGGCGCGGCACTTGATTGGGCTCCCGAAGGTCGCCgcaagcggcaa                                                                                                       <  8:165808/147‑1 (MQ=255)                                           tttGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGaccttcgggagcccaatcaagtgccccgacgcgccataggtagaca                                                                                                       <  1:29838‑M1/147‑47 (MQ=255)                                           tttGCATGGTATGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCgcaagcggcaa                                                                                                       <  4:229134/147‑1 (MQ=255)                                               cATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAg                                                                                                 >  5:231289/1‑149 (MQ=255)                                               cATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAg                                                                                                 >  3:306959/1‑149 (MQ=255)                                                aTGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGTGaccttcgggagcccaatcaagtgccccgacgcgccataggta                                                                                                           >  1:96583‑M1/1‑96 (MQ=255)                                                aTGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGTGaccttcgggagcccaatcaagtgccccgacgcgccataggta                                                                                                           <  2:96583‑M1/138‑43 (MQ=255)                                                   gTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGa                                                                                             <  1:69219/149‑1 (MQ=255)                                                          tccgtccgCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATg                                                                                      <  6:147201/149‑1 (MQ=255)                                                              tccgCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGc                                                                                  >  8:333646/1‑149 (MQ=255)                                                                 gcgAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTAGTCTACCTATGGCGCGTCGGGGCACTTCAATGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGACGCttt                                                                               >  5:205508/1‑149 (MQ=255)                                                                  cgAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTg                                                                              <  6:231289/149‑1 (MQ=255)                                                                     aaGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGCGGCTTTGGCa                                                                           >  3:321420/1‑149 (MQ=255)                                                                      aGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCAt                                                                          <  3:254341/149‑1 (MQ=255)                                                                      aGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCAt                                                                          <  1:206791/149‑1 (MQ=255)                                                                       gCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATg                                                                         <  4:25930/149‑1 (MQ=255)                                                                                    aTTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCgcaagcggcaag                                                                                                      >  8:135697/1‑107 (MQ=255)                                                                                    aTTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCa                                                            <  4:306959/149‑1 (MQ=255)                                                                                        gtcgAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCAc                                                           >  2:110926/1‑146 (MQ=255)                                                                                           gAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGaa                                                      <  7:333646/148‑1 (MQ=255)                                                                                           gAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAAt                                                     >  5:211843/1‑149 (MQ=255)                                                                                                 cTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATcc                                               >  1:153667/1‑149 (MQ=255)                                                                                                  tCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCAt                                                                          <  4:103778/121‑1 (MQ=255)                                                                                                  tCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCAt                                                                          >  3:103778/1‑121 (MQ=255)                                                                                                    gTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCACAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGa                                            <  5:309305/149‑1 (MQ=255)                                                                                                     ttttCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGAt                                           <  6:304486/149‑1 (MQ=255)                                                                                                          aTAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGcc                                      >  1:227078/1‑149 (MQ=255)                                                                                                          aTAGCAATTCTGTTGGCAGGTCTTGTCTACATATGGCGCGTCGGGGCACTTGATTGGGCTCCAGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATAGATCCGGATGCGcc                                      >  1:221685/1‑149 (MQ=255)                                                                                                              cAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAAc                                  <  2:269352/149‑1 (MQ=255)                                                                                                               aaTTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAAc                                  >  8:132992/1‑148 (MQ=255)                                                                                                                     gTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAg                            >  2:182253/1‑148 (MQ=255)                                                                                                                       tGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAg                               >  8:36550/1‑143 (MQ=255)                                                                                                                       tGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAg                               <  7:36550/143‑1 (MQ=255)                                                                                                                         gCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGTGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTAcc                        <  2:221685/148‑1 (MQ=255)                                                                                                                         gCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTAcc                        <  2:227078/148‑1 (MQ=255)                                                                                                                             gTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCcggtc                   <  2:5987/149‑1 (MQ=255)                                                                                                                                 tGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTcgccataggtagacaagacctgccaacagaattgctatgaaaacgagtgcttcgacgaatccggtccagccgctttcgcggacggacacagaccatgcaaa                 <  1:29838‑M2/147‑102 (MQ=255)                                                                                                                                  gTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCcggtcgg                 <  2:153667/146‑1 (MQ=255)                                                                                                                                    cTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCa                             >  3:173570/1‑132 (MQ=255)                                                                                                                                    cTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCa                             <  4:173570/132‑1 (MQ=255)                                                                                                                                     tACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTcaccataggtagacaagacctgccaacagaattgctatgaaaacgagtgcttcgacgaatccggtccagccgctttcgcggacggacacagaccat                      >  1:96583‑M2/1‑42 (MQ=255)                                                                                                                                     tACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTcaccataggtagacaagacctgccaacagaattgctatgaaaacgagtgcttcgacgaatccggtccagccgctttcgcggacggacacagaccat                      <  2:96583‑M2/138‑97 (MQ=255)                                                                                                                                     tACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCCGGTCGGTGAACg           >  2:215240/1‑149 (MQ=255)                                                                                                                                       ccTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCCGGTCGGTGAAc            <  1:182253/146‑1 (MQ=255)                                                                                                                                            ggCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCCGGTCGGTGAACGGGAAAcc    >  6:367148/1‑149 (MQ=255)                                                                                                                                             gcgcGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGATCAGTACCCGGTCGGTGAACGGGAAAcc    <  3:229984/148‑1 (MQ=255)                                                                                                                                             gcgcGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCCGGTCGGTGAACGGGAAAcc    <  3:225187/148‑1 (MQ=255)                                                                                                                                             gcgcGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCCGGTCGGTGAACGGGAAACCg   >  4:202460/1‑149 (MQ=255)                                                                                                                                             gCGaccttcgggagcccaatcaagtgccccgacgcgccataggtagacaagacctgccaacagaattgctatgaaaacgagtgcttcgacgaatccggtccagccgctttcgcggacggacacagaccatgcaaagagaaagagggctt   <  3:25930‑M1/149‑147 (MQ=255)                                                                                                                                               gaccttcgggagcccaatcaagtgccccgacgcgccataggtagacaagacctgccaacagaattgctatgaaaacgagtgcttcgacgaatccggtccagccgctttcgcggacggacacagaccatgcaaagagaaagagggcttc  >  7:227121‑M1/1‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                    GCGATGCTGTTCGTGATCTTCGATATCGAAGCCCTCTTTCTCTTTGCATGGTCTGTGTCCGTCCGCGAAAGCGGCTGGACCGGATTCGTCGAAGCACTCGTTTTCATAGCAATTCTGTTGGCAGGTCTTGTCTACCTATGGCGCGTCGGGGCACTTGATTGGGCTCCCGAAGGTCGCCGCAAGCGGCAAGCGAAGCTGAAACAATGAGGCTTTGGCATGCAATACAATCTCACCAGAATCGATCCGGATGCGCCCAACGAGCAGTACCCGGTCGGTGAACGGGAAACCGT  >  NC_002947/4656392‑4656681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.