| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4706389 | 58 (0.980) | 4 (0.070) | 4/244 | NT | 6.8% | coding (103/1053 nt) | PP_4162 | membrane protein |
| ? | NC_002947 | = 4706417 | 55 (0.980) | coding (75/1053 nt) | PP_4162 | membrane protein | |||||
ATCGGCCAGGTTGAACCCCAGCCACACCAGCGGCAGTGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4706240‑4706389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggcACCCTTCATATCGGCATTGCTGTGGGGCGCCATCCTGGCCTTTGCCAGCTGGCCGTTGATGCGCTTTCTTACGCGCCTGCTGGGCGGTCGCGAGACGCTGGCCGCCGGCCTGCTGACCA < NC_002947/4706417‑4706299 ATCGGCCAGGTTGAACCCCAGCCACACCAGCGGCAGTGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATG < 6:94416/148‑1 CCAGGTTGAACCCCAGCCACACCAGCGGCAGTGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGCCCGCCCAGCAGATTGTTGGGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATGGC > 1:126853/1‑149 CAGTGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATG > 5:386263/1‑115 CAGTGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATG < 6:386263/115‑1 AGTGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATGGCACCCTTCATATCGGCATTGCTGTGGGGCGCCAT < 7:225074/149‑1 GTGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATGGCACCCTTCATATCGGCATTGCTGTGGGGCGCCATC < 1:151504/149‑1 TGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATGGCACCCTTCATATCGGCATTGCTGTGGGGCGCCATCC < 3:119713/149‑1 CCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATGGCACCCTTCATATCGGCATTGCTGTGGGGCGCCATCCTG < 1:375674/149‑1 CACCCTTCATATCGGCATTGCTGTGGGGCGCCATCCTGGCCTTTGCCAGCTGGCCGTTGATGCGCTTTCTTACGCGCCTGCTGGGCGGTCGCGAGACGCTGGCCGCCGGCCTGCTGACCA > 7:125403/1‑120 CACCCTTCATATCGGCATTGCTGTGGGGCGCCATCCTGGCCTTTGCCAGCTGGCCGTTGATGCGCTTTCTTACGCGCCTGCTGGGCGGTCGCGAGACGCTGGCCGCCGGCCTGCTGACCA < 8:125403/120‑1 ATCGGCCAGGTTGAACCCCAGCCACACCAGCGGCAGTGCCACGATCAGGATCCAGGCCATGGTCAGCAGGCCGGCGGCCAGCGTCTCGCGACCGCCCAGCAG‑‑‑G‑CGCGTAAGAAAGCGCATCAACGGCCAGCTGGCAAAGGCCAGGATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4706240‑4706389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggcACCCTTCATATCGGCATTGCTGTGGGGCGCCATCCTGGCCTTTGCCAGCTGGCCGTTGATGCGCTTTCTTACGCGCCTGCTGGGCGGTCGCGAGACGCTGGCCGCCGGCCTGCTGACCA < NC_002947/4706417‑4706299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |