New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4735578 | 36 (0.610) | 3 (0.050) | 3/240 | NT | 8.2% | coding (57/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
? | NC_002947 | = 4735611 | 33 (0.600) | coding (24/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
AGCAGTACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4735426‑4735578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcagcgCATGTGGGATAGCGCCCACCTTTCAGGTGGTAACGCTGCATATGTGGAAGAGCTCTACGAGCTCTACCTGCACGACCCTAACGCTGTGCCAGAAGAGTGGCGCACTTACTTCCAGAAGTTGC < NC_002947/4735611‑4735490 AGCAGTACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCTTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGC < 8:195378/149‑1 GCAGTACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCA < 5:142156/149‑1 GTACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCG < 6:28950/149‑1 ATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGCATGTGGGATAGCGCCCACCTTTCAGGTGGTAAC > 2:189428/1‑149 GCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGCATGTGGGATAGCGCCCACCTTTCAGGTGGTAACGCTGCAT < 1:189428/149‑1 CGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGCATGTGGGATAGCGCCCACCTTTCAGGGGGTAACGCTGCATA < 5:336331/149‑1 AGCGCATGTGGGATAGCGCCCACCTTTCAGGTGGTAACGCTGCATATGTGGAAGAGCTCTACGAGCTCTACCTGCACGACCCTAACGCTGTGCCAGAAGAGTGGCGCACTTACTTCCAGAAGTTGC > 8:302873/1‑126 AGCAGTACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4735426‑4735578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcagcgCATGTGGGATAGCGCCCACCTTTCAGGTGGTAACGCTGCATATGTGGAAGAGCTCTACGAGCTCTACCTGCACGACCCTAACGCTGTGCCAGAAGAGTGGCGCACTTACTTCCAGAAGTTGC < NC_002947/4735611‑4735490 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |