New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4735578	36 (0.610)	3 (0.050)	3/240	NT	8.2%	coding (57/2832 nt)	sucA	2‑oxoglutarate dehydrogenase subunit E1
	?	NC_002947	= 4735611	33 (0.600)					coding (24/2832 nt)	sucA	2‑oxoglutarate dehydrogenase subunit E1

GTACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGTCCGAAAACAGCGACTGAACCACGCCACTTGGAT  >  NC_002947/4735430‑4735726                                                                                                                                                     |                                                                                                                                                     gTACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCG                                                                                                                                                      <  6:28950‑M1/149‑1 (MQ=255)  tACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGt                                                                                                                                                     <  5:147359/149‑1 (MQ=255)        aTGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTaccac                                                                                                                                               <  6:111548/149‑1 (MQ=255)               cgGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTATGTTCGCCACTCTTCTGACACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTacc                                                                                                                                                 <  1:177523/140‑1 (MQ=255)               cgGATTGTCGAGTGCGATACATCAGTAGCGGAGCTGCCGTCCGCTGGCAACTTCAGGAAGTAAGTGCGCCACTCTTCACACACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCAATTACACATAAGCAGCGTTacc                                                                                                                                                 >  2:177523/1‑140 (MQ=255)                      tCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTTTCAGGTggtaa                                                                                                                                 >  7:225256/1‑146 (MQ=255)                      tCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGgc                                                                                                                                  <  1:378460/148‑1 (MQ=255)                         aGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTa                                                                                                                              <  2:356125/149‑1 (MQ=255)                         aGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTa                                                                                                                              >  3:139517/1‑149 (MQ=255)                             cGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATcc                                                                                                                           >  5:136430/1‑148 (MQ=255)                               aTACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCcac                                                                                                                        <  4:62412/149‑1 (MQ=255)                                   aTCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGcatgtgggatagcgcccacctttcaggtggtaac                                                                                                                    >  2:189428‑M1/1‑115 (MQ=255)                                          gCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGcatgtgggatagcgcccacctttcaggtggtaacgctgcat                                                                                                             <  1:189428‑M1/149‑42 (MQ=255)                                           cGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGcatgtgggatagcgcccacctttcagggggtaacgctgcata                                                                                                            <  5:336331‑M1/149‑43 (MQ=255)                                             gTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCAc                                                                                                          <  4:139517/149‑1 (MQ=255)                                                           tGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGc                                                                                            >  8:18913/1‑149 (MQ=255)                                                             gCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGcgct                                                                                                                 >  8:302873‑M2/1‑122 (MQ=255)                                                              cAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCt                                                                                                                                             >  6:226138/1‑97 (MQ=255)                                                                 cTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTc                                                                                      <  6:136430/149‑1 (MQ=255)                                                                  ttCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCa                                                                                     >  7:112067/1‑149 (MQ=255)                                                                       gAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCAccc                                                                                  <  7:18913/147‑1 (MQ=255)                                                                       gAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTc                                                                                >  6:328821/1‑149 (MQ=255)                                                                              gtGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCcac                                                                                                                        >  8:40082/1‑102 (MQ=255)                                                                              gtGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCcac                                                                                                                        <  7:40082/102‑1 (MQ=255)                                                                              gtGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAgg                                                                         <  5:328821/149‑1 (MQ=255)                                                                                  gcCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGc                                                                                                >  3:253948/1‑122 (MQ=255)                                                                                  gcCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGAc                                                                     <  8:112067/149‑1 (MQ=255)                                                                                  gcCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGATTTCTTGc                                                                                                <  4:253948/122‑1 (MQ=255)                                                                                    cACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGc                                                                                                <  2:193823/120‑1 (MQ=255)                                                                                    cACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGc                                                                                                >  1:193823/1‑120 (MQ=255)                                                                                                acaGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGc                                                       >  5:348944/1‑149 (MQ=255)                                                                                                          ggTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCga                                                           <  6:359092/135‑1 (MQ=255)                                                                                                          ggTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCga                                                           >  5:359092/1‑135 (MQ=255)                                                                                                                gCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCCACCTCGATTAGGGGACTGATCGGCGAGAGCCCCAGCAAAGCTGGa                                        >  3:50997/1‑148 (MQ=255)                                                                                                                  tggaagagctctacgagctcTACCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGaa                                       >  2:117388/5‑147 (MQ=255)                                                                                                                   ggaagagctctacgagctcTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTgg                                         >  8:24900/4‑144 (MQ=255)                                                                                                                   ggaagagctctacgagctcTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTgg                                         <  7:24900/141‑1 (MQ=255)                                                                                                                   ggTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAg                                    >  4:208554/1‑149 (MQ=255)                                                                                                                    gtagagctcgtagagctcTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGt                                   >  3:249025/1‑149 (MQ=255)                                                                                                                       gagctcgtagagctcTTCCACATATGCAGCGATACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGTcc                                 <  4:63891/148‑1 (MQ=255)                                                                                                                                        ccACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGTCCGaa                              >  4:153475/1‑134 (MQ=255)                                                                                                                                        ccACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGTCCGaa                              <  3:153475/134‑1 (MQ=255)                                                                                                                                             tatGCAGCGTTACCCCCTGAAAGGTGGGCGCTATCCCACATGcgctgcatatgtggaagagctctacgagctctacctgcacgaccctaacgctgtgccagaagagtggcgcacttacttccagaagttgccagccgacggcagcaccg          <  5:336331‑M2/149‑108 (MQ=255)                                                                                                                                              atGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGcgctgcatatgtggaagagctctacgagctctacctgcacgaccctaacgctgtgccagaagagtggcgcacttacttccagaagttgccagccgacggcagcaccgc         <  1:189428‑M2/149‑109 (MQ=255)                                                                                                                                              atGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGTCCGAAAACAGCGACTGAACCACGCCa         >  7:230291/1‑149 (MQ=255)                                                                                                                                              atGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGTCCGAAAACAGCGACTGAACCACGCCa         >  4:174815/1‑149 (MQ=255)                                                                                                                                                  aGCGcatgtgggatagcgcccacctttcaggtggtaacgctgcatatgtggaagagctctacgagctctacctgcacgaccctaacgctgtgccagaagagtggcgcacttacttccagaagttgc                            >  8:302873‑M1/1‑4 (MQ=255)                                                                                                                                                    cGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGTCCGAAAACAGCGACTGAACCACGCCACTTGGa   <  6:348944/149‑1 (MQ=255)                                                                                                                                                     gTTACCACCTGAAAGGTGGGCGCTATCCCACATGcgctgcatatgtggaagagctctacgagctctacctgcacgaccctaacgctgtgccagaagagtggcgcacttacttccagaagttgccagccgacggcagcaccgctactgat  >  2:189428‑M2/1‑34 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GTACGAAATGGTCGCGGATTGTCGAGTGCGATACATCAGTAGCGGTGCTGCCGTCGGCTGGCAACTTCTGGAAGTAAGTGCGCCACTCTTCTGGCACAGCGTTAGGGTCGTGCAGGTAGAGCTCGTAGAGCTCTTCCACATATGCAGCGTTACCACCTGAAAGGTGGGCGCTATCCCACATGCGCTGCATCACGCTTTCTTGCATGCTTGGTCACCCTCGATTAGGGGACTGATCGGCGAGAGCCACAGCAAACCTGGAAAAGTCCGAAAACAGCGACTGAACCACGCCACTTGGAT  >  NC_002947/4735430‑4735726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.