New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4767338 =45 (0.760)5 (0.090) 4/246 NT 10.7% coding (1991/2439 nt) fpvA TonB‑dependent outer membrane ferripyoverdine receptor FpvA
?NC_002947 4767365 = 40 (0.700)coding (2018/2439 nt) fpvA TonB‑dependent outer membrane ferripyoverdine receptor FpvA

GTAGGTGGTGCTCAGCTTGAACAGGTGTTCTGGCAGGTCGGTGTCGAACTTGGTGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4767489‑4767338
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caactGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGAGCAC  >  NC_002947/4767365‑4767482
                                                                                                                                                                                                                                                                              
GTAGGTGGTGCTCAGCTTGAACAGGTGTTCTGGCAGGTCGGTGTCGAACTTGGTGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATC                                                                                                                            >  5:64520/1‑148
                                                     TGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATC                                                                                                                            >  7:115932/1‑95
                                                     TGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATC                                                                                                                            <  8:115932/95‑1
                                                                                                                        TTGCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTTGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAA                                                    <  5:43849/100‑1
                                                                                                                        TTGCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTTGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAA                                                    >  6:43849/1‑100
                                                                                                                          GCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGAGCAC  >  3:263003/1‑148
                                                                                                                          GCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAA                                            <  1:124344/106‑1
                                                                                                                          GCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAA                                            >  2:124344/1‑106
                                                                                                                                                                                                                                                                              
GTAGGTGGTGCTCAGCTTGAACAGGTGTTCTGGCAGGTCGGTGTCGAACTTGGTGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4767489‑4767338
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caactGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGAGCAC  >  NC_002947/4767365‑4767482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.