New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4767338 = | 45 (0.760) | 5 (0.090) | 4/246 | NT | 10.7% | coding (1991/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
? | NC_002947 | 4767365 = | 40 (0.700) | coding (2018/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
GTAGGTGGTGCTCAGCTTGAACAGGTGTTCTGGCAGGTCGGTGTCGAACTTGGTGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4767489‑4767338 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caactGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGAGCAC > NC_002947/4767365‑4767482 GTAGGTGGTGCTCAGCTTGAACAGGTGTTCTGGCAGGTCGGTGTCGAACTTGGTGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATC > 5:64520/1‑148 TGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATC > 7:115932/1‑95 TGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATC < 8:115932/95‑1 TTGCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTTGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAA < 5:43849/100‑1 TTGCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTTGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAA > 6:43849/1‑100 GCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGAGCAC > 3:263003/1‑148 GCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAA < 1:124344/106‑1 GCCAGTTGGGGGTCAGTGCGCCCATCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAA > 2:124344/1‑106 GTAGGTGGTGCTCAGCTTGAACAGGTGTTCTGGCAGGTCGGTGTCGAACTTGGTGCCTTCCTTGTTCTTGTCGGCATCCTTGCGGTACTTGGTTTGCGAGTAGGTGTAGCCTGCGCCGACTTGCCAGTTGGGGGTCAGTGCGCCCATCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4767489‑4767338 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caactGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGAGCAC > NC_002947/4767365‑4767482 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |