New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4767338 =	45 (0.760)	5 (0.090)	4/246	NT	10.7%	coding (1991/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
	?	NC_002947	4767365 =	40 (0.700)					coding (2018/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA

TACTTCGACGGCGCACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGA  >  NC_002947/4767190‑4767478                                                                                                                                                      |                                                                                                                                             tACTTCGACGGCGCACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGa                                                                                                                                              <  4:141484/149‑1 (MQ=255)    ttCGACGGCGCACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGtt                                                                                                                                           >  3:186132/1‑149 (MQ=255)       gACGGCGCACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGAt                                                                                                                                        <  3:360832/149‑1 (MQ=255)         cGGCGCACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATgg                                                                                                                                      <  5:305467/149‑1 (MQ=255)         cGGCGCACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATgg                                                                                                                                      <  5:300249/149‑1 (MQ=255)          ggCGCACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATggg                                                                                                                                     <  3:349739/149‑1 (MQ=255)           gcgcACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGgc                                                                                                                                    <  3:323151/149‑1 (MQ=255)                              ggcgATCTTCCAGATCGACCAGGAAAACCGCGCCGGCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTgg                                                                                                                  >  1:56760/1‑149 (MQ=255)                                gtgctcagcttgaacaggtgttctggcaggtcggtgtcgaacttggtgccttccttgttcttgtcggcatccttgcggtacttggtttgcgagtaggtgtagcctgcgccgacttgccAGTTGATGGGCGCACTGACCCCCAACTGGc                                                                                                                 >  3:263003‑M1/119‑148 (MQ=255)                                cgATCTTCCCGCTCGACCAGGAAAACCGCGCG‑GGAGAAGCTTCTAACCAGGAAGGTTGCGTCGACTTCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCaa                                                                                                               <  8:265702/149‑1 (MQ=255)                                cgATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCaa                                                                                                               <  5:148474/149‑1 (MQ=255)                                      tCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGgc                                                                                                         >  4:42484/1‑149 (MQ=255)                                       ccAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGgcg                                                                                                        >  6:306867/1‑149 (MQ=255)                                          gATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAg                                                                                                     >  5:165754/1‑149 (MQ=255)                                          gATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAg                                                                                                     <  3:42484/149‑1 (MQ=255)                                                  aGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACAcc                                                                                             <  6:327512/149‑1 (MQ=255)                                                      aaaCCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCTGCGCAGGCTACACCTACt                                                                                         >  6:376403/1‑149 (MQ=255)                                                           gcgcC‑GCTGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACGTGCTACGAAGCGTCGGGCAAGGTACGCACCCACGGTATCGACCTGGa                                                                                                                                              <  3:61042/91‑1 (MQ=255)                                                           gcgcC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCAGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGa                                                                                                                                              >  4:61042/1‑91 (MQ=255)                                                                 gcAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCaa                                                                               <  2:160005/149‑1 (MQ=255)                                                                     aaGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTAc                                                                           >  6:64520/1‑149 (MQ=255)                                                                     aaGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTAc                                                                           <  2:56760/149‑1 (MQ=255)                                                                         ttCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGc                                                                        >  7:144634/1‑148 (MQ=255)                                                                          ttggtgccttccttgttcttgtcggcatccttgcggtacttggtttgcgagtaggtgtagcctgcgccgacttgccAGTTGATGGGCGCACTGACCCCCAACTGGc                                                                                                                 >  2:124344‑M1/77‑106 (MQ=255)                                                                          ttggtgccttccttgttcttgtcggcatccttgcggtacttggtttgcgagtaggtgtagcctgcgccgacttgccAGTTGATGGGCGCACTGACCCCCAACTGGc                                                                                                                 <  1:124344‑M1/30‑1 (MQ=255)                                                                           cTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCTGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCaa                                                                      <  5:376403/148‑1 (MQ=255)                                                                               ccAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATg                                                                 >  1:202796/1‑149 (MQ=255)                                                                                cAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGc                                                                <  6:211968/149‑1 (MQ=255)                                                                                 aGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCTGCGCa                                                                                                      <  3:5465/110‑1 (MQ=255)                                                                                 aGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCa                                                                                                      >  4:5465/1‑110 (MQ=255)                                                                                  ttccttgttcttgtcggcatccttgcggtacttggtttgcgagtaggtgtagcctgcgccaacttgccAGTTGATGGGCGCACTGACCCCCAACTGGCaa                                                                                                               <  5:43849‑M1/32‑1 (MQ=255)                                                                                  ttccttgttcttgtcggcatccttgcggtacttggtttgcgagtaggtgtagcctgcgccaacttgccAGTTGATGGGCGCACTGACCCCCAACTGGCaa                                                                                                               >  6:43849‑M1/69‑100 (MQ=255)                                                                                        ttGCGTCGACATAACCAGCTACGAAGCCTCGTCCAAGGTACCCACCCACGGTATCGACCTGGAGATGATGGGCGCACTGCCCCCCAACGGGCAACTCGGCGCAGGATACACCTACTCGCAACCCAAGTACCCCAAGCATGCCCACAAg                                                         >  8:102288/1‑148 (MQ=255)                                                                                          gCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGaa                                                       <  2:202796/148‑1 (MQ=255)                                                                                                aCATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACaaggaa                                                <  5:306867/149‑1 (MQ=255)                                                                                                  aTCACCTGCTACGAAGCATCGGGCATGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCGAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACaaggaagg                                              <  7:102288/149‑1 (MQ=255)                                                                                                    cACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCa                                            >  7:182827/1‑149 (MQ=255)                                                                                                    cACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCa                                            >  6:49116/1‑149 (MQ=255)                                                                                                     aCCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACaag                                                   >  1:186049/1‑141 (MQ=255)                                                                                                     aCCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACaag                                                   <  2:186049/141‑1 (MQ=255)                                                                                                           tACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGgc                                                                                                         <  7:357008/81‑1 (MQ=255)                                                                                                           tACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGtt                                     >  2:73205/1‑149 (MQ=255)                                                                                                                aGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGaca                                <  2:42038/149‑1 (MQ=255)                                                                                                                aGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGaca                                <  1:73205/149‑1 (MQ=255)                                                                                                                 gCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGacac                               <  6:165754/149‑1 (MQ=255)                                                                                                                       ggCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCt                         <  4:368884/149‑1 (MQ=255)                                                                                                                            ggTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACCCCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGc                       >  5:334644/1‑146 (MQ=255)                                                                                                                                cGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCTACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAac                 <  5:49116/148‑1 (MQ=255)                                                                                                                                 gCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAacac               <  8:144634/149‑1 (MQ=255)                                                                                                                                   aCCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAacac               >  5:333303/1‑147 (MQ=255)                                                                                                                                   aCCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCt             >  4:366006/1‑149 (MQ=255)                                                                                                                                   aCCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCt             <  3:366006/149‑1 (MQ=255)                                                                                                                                           tATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGc     <  6:333303/149‑1 (MQ=255)                                                                                                                                               gACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGa  <  8:182827/148‑1 (MQ=255)                                                                                                                                                 ccTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCAcc                                          <  4:265055/106‑1 (MQ=255)                                                                                                                                                 ccTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCAcc                                          >  3:265055/1‑106 (MQ=255)                                                                                                                                                      |                                                                                                                                             TACTTCGACGGCGCACTCAACGCCAGCGCGGCGATCTTCCAGATCGACCAGGAAAACCGCGCC‑GCAGAAGCTTCTAACCAGGAAGGTTGCGTCGACATCACCTGCTACGAAGCCTCGGGCAAGGTACGCACCCACGGTATCGACCTGGAGTTGATGGGCGCACTGACCCCCAACTGGCAAGTCGGCGCAGGCTACACCTACTCGCAAACCAAGTACCGCAAGGATGCCGACAAGAACAAGGAAGGCACCAAGTTCGACACCGACCTGCCAGAACACCTGTTCAAGCTGA  >  NC_002947/4767190‑4767478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.