| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4904213 | 61 (1.030) | 3 (0.050) | 3/240 | NT | 5.1% | coding (621/663 nt) | PP_4312 | hypothetical protein |
| ? | NC_002947 | = 4904245 | 54 (0.970) | coding (589/663 nt) | PP_4312 | hypothetical protein | |||||
CGAACCAGCGCGTAAGCCGTCGCCAGGCCCACCACTCCACCACCGATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4904059‑4904213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcgcGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAGGGCCTGAATGACGGTGCGCATAGCTGCCCGACCTGATCCGCTGGTACTGTTTGGCAAGGAAGCCGGAACAGGGATGAGCGATGAAGCAGCGGGTAACGGTGATCGGTGG < NC_002947/4904245‑4904098 CGAACCAGCGCGTAAGCCGTCGCCAGGCCCACCACTCCACCACCGATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCC < 1:225484/149‑1CGAACCAGCGCGTAAGCCGTCGCCAGGCCCACCACTCCACCACCGATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCC > 1:25506/1‑149CGAACCAGCGCGTAAGCCGTCGCCAGGCCCACCACTCCACCACCGATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCC < 4:237839/149‑1 AGCGCGTAAGCCGTCGCCAGGCCCACCACTCCACCACCGATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCCTGGCG > 3:330329/1‑148 CACCACCGATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCCTGGCGCGATGGCAAAGCCAGCCTGCTGAGCCGCAATG > 7:107648/1‑149 CACCACCGATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCC < 2:320236/111‑1 ATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCCTGGCGCGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAG < 3:264639/149‑1 TTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCCTGGCGCGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAGGGCCTGA < 8:107648/149‑1 GCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCCT > 5:319782/1‑92 GCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCCT < 6:319782/92‑1 CTGGCGCGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAGGGCCTGAATGACGGTGCGCATAGCTGCCCGACCTGATCCGCTGGTACTGTTTGGCAAGGAAGCCGGAACAGGGATGAGCGATGAAGCAGCGGGTAACGGTGAT > 5:111778/1‑149 GCGCGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAGGGCCTGAATGACGGTGCGCATAGCTGCCCGACCTGCTCCGCTGGTACTGTTTGGCAAGGAAGCCGGAACAGGGATGAGCGATGAAGCAGCGGGTAACGGTGATCGG > 3:264360/1‑149 GCGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAGGGCCTGAATGACGGTGCGCATAGCTGCCCGACCTGATCCGCTGGTACTGTTTGGCAAGGAAGCCGGAACAGGGATGAGCGATGAAGCAGCGGGTAACGGTGATCGGTG < 6:92035/149‑1 CGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAGGGCCTGAATGACGGTGCGCATAGCTGCCCGACCTGATCCGCTGGTACTGTTTGGCAAGGAAGCCGGAACAGGGATGAGCGATGAAGCAGCGGGTAACGGTGATCGGTGG < 6:105764/149‑1 CGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAGGGCCTGAATGACGGTGCGCATAGCTGCCCGACCTGATCCGCTGGTACTGTTTGGCAAGGAAGCCGGAACAGGGATGAGCGATGAAGCAGCGGGTAACGGTGATCGGTGG > 8:328059/1‑149 CGAACCAGCGCGTAAGCCGTCGCCAGGCCCACCACTCCACCACCGATCACCGTTACCCGCTGCTTCATCGCTCATCCCTGTTCCGGCTTCCTTGCCAAACAGTACCAGCGGATCAGGTCGGGCAGCTATGCGCACCGTCATTCAGGCCCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4904059‑4904213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcgcGATGGCAAAGCCAGCCTGCTGAGCCGCAATGTGCGCCAGGGCCTGAATGACGGTGCGCATAGCTGCCCGACCTGATCCGCTGGTACTGTTTGGCAAGGAAGCCGGAACAGGGATGAGCGATGAAGCAGCGGGTAACGGTGATCGGTGG < NC_002947/4904245‑4904098 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |