New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5213292 = | 68 (1.150) | 3 (0.050) | 3/238 | NT | 5.3% | coding (420/1182 nt) | PP_4594 | cystathionine gamma‑synthase |
? | NC_002947 | 5213361 = | 44 (0.800) | coding (351/1182 nt) | PP_4594 | cystathionine gamma‑synthase |
TTGAGCTGCTGCCCAAGGATGCCCACGTGGTGGTGATGAACGGCGTGTACGGTGGCACGTTCCGCATCATGGAAGATTACCGCAGCCGCACCTCGGGGCTGACCACCACCTATGTCGATCTCAACGACATTGAAGCCGTAGCGGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5213440‑5213292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggctgcgGTAATCTTCCATGATGCGGAACGTGCCACCGTACACGCCGTTCATCACCACCACGTGGGCATCCTTGGGCAGCAGCTCAAGCACGGTTGCGGTGGCATTGACTCCCGAGGCGCAGGCCACAGCGCCCACGCCTTCTTCCAAGGCAGC > NC_002947/5213361‑5213507 TTGAGCTGCTGCCCAAGGATGCCCACGTCGTGGTGATGAACGGCGTGTACGGTGGCACGTTCCGCATCATGCAAGATTACCGCAGCCGCACCTCGGGGCTGACCACCACCTATGTCGATCTCAACGACATTGAAGCCGTAGCGGCTGC > 2:237911/1‑148 CCGCAGCCGCACCTCGGGGCTGACCACCACCTATGTCGATCTCAACGACATTGAAGCCGTAGCGGCTGCGGTAATCTTCCATGATGCGGAACGTGCCACCGTACACGCCGTTCATCACCACCACGTGGGCATCCTTGGGCAGCAGCTC > 4:235977/1‑148 CGCAGCCGCACCTCGGGGCTGACCACCACCTATGTCGATCTCAACGACATTGAAGCCGTAGCGGCTGCGGTAATCTTCCATGATGCGGAACGTGCCACCGTACACGCCGTTCATCACCACCACGTGGGCATCCTTGGGCAGCAGCTCAA > 7:18506/1‑149 ACCACCACCTATGTCGATCTCAACGACATTGAAGCCGTAGCGGCTGCGGTAATCTTCCATGATGCGGAACGTGCCACCGTACACGCCGTTCATCACCACCACGTGGGCATCCTTGGGCAGCAGCTCAAGCACGGTTGCGGTGGCATTGA < 8:18506/149‑1 CGGCTGCGGTAATCTTCCATGATGCGGAACGTGCCACCGTACACGCCGTTCATCACCACCACGTGGGCATCCTTGGGCAGCAGCTCAAGCACGGTTGCGGTGGCATTGACTCCCGAGGCGCAGGCCACAGCGCCCACGCCTTCTTCC > 3:178340/1‑147 GCTGCGGTAATCTTCCATGATGCGGAACGTGCCACCGTACACGCCGTTCATCACCACCACGTGGGCATCCTTGGGCAGCAGCTCAAGCACGGTTGCGGTGGCATTGACTCCCGAGGCGCAGGCCACAGCGCCCACGCCTTCTTCCAAGG > 5:150482/1‑149 GGTAATCTTCCATGATGCGGAACGTGCCACCGTACACGCCGTTCATCACCACCACGTGGGCATCCTTGGGCAGCAGCTCAAGCACGGTTGCGGTGGCATTGACTCCCGAGGCGCAGGCCACAGCGCCCACGCCTTCTTCCAAGGCAGC > 1:163436/1‑148 TTGAGCTGCTGCCCAAGGATGCCCACGTGGTGGTGATGAACGGCGTGTACGGTGGCACGTTCCGCATCATGGAAGATTACCGCAGCCGCACCTCGGGGCTGACCACCACCTATGTCGATCTCAACGACATTGAAGCCGTAGCGGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5213440‑5213292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggctgcgGTAATCTTCCATGATGCGGAACGTGCCACCGTACACGCCGTTCATCACCACCACGTGGGCATCCTTGGGCAGCAGCTCAAGCACGGTTGCGGTGGCATTGACTCCCGAGGCGCAGGCCACAGCGCCCACGCCTTCTTCCAAGGCAGC > NC_002947/5213361‑5213507 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |