| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5262156 | 56 (0.950) | 6 (0.110) | 6/240 | NT | 9.7% | coding (329/1488 nt) | PP_4638 | methylenetetrahydrofolate reductase |
| ? | NC_002947 | = 5262203 | 59 (1.060) | coding (376/1488 nt) | PP_4638 | methylenetetrahydrofolate reductase | |||||
TCACCGCTGGACGCCCTCGCCTCGTTCAGCAACCCGGTGCCTGCCCTGCCGCATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5262005‑5262156‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgaccgATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAGTCAGCAGTAACAGCTGGTCGAGGCCGGCGGCGTCCATGCGCTGCAGTTGGGCGAGCAGGTGGTGGCGTTCGCGATCCTTGCCTGAAAAATG < NC_002947/5262203‑5262056 TCACCGCTGGACGCCCTCGCCTCGTTCAGCAACACGGTGCCTGCCCTGCCGCATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGA > 1:44737/1‑149 AGCAACCCGGTGCCTGCCCTGCCGCATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGATTCCAGATAACGCACCGGGCGCT > 6:63751/1‑149 ACCCGGTGCCTGCCCTGCCGCATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGAC < 7:191064/119‑1 ACCCGGTGCCTGCCCTGCCGCATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGAC > 8:191064/1‑119 AGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCA < 5:63751/149‑1 CCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAGT < 5:100887/118‑1 CCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAGT > 6:100887/1‑118 GCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAG > 3:281918/1‑108 GCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAG < 4:281918/108‑1 CGACCGATTCCAGATAACGCACCGGGTGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAGTCAGCAGTAACAGCTGGTCGAGGCCGGCGGCGTCCATGCGCTGCAGTTGGGCGAGCAGGTGGTGGCGTTCGCGATCCTTGCCTGA > 3:143378/1‑148 GATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAGTCAGCAGTAACAGCTGGTCGAGGCCGGCGGCGTCCATGCGCTGCAGTTGGGCGAGCAGGTGGTGGCGTTCGCGATCCTTGCCTGAAAAATG > 7:145556/1‑149 GATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAGTCAGCAGTAACAGCTGGTCGAGGCCGGCGGCGTCCATGCGCTGCAGTTGGGCGAGCAGGTGGTGACGTTCGCGATCCTTGCCTGAAAAATG < 7:39760/149‑1 TCACCGCTGGACGCCCTCGCCTCGTTCAGCAACCCGGTGCCTGCCCTGCCGCATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5262005‑5262156‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgaccgATTCCAGATAACGCACCGGGCGCTGGCCAGGTTCATGGCCGGGCAGGCGGTCGCCAGTCAGCAGTAACAGCTGGTCGAGGCCGGCGGCGTCCATGCGCTGCAGTTGGGCGAGCAGGTGGTGGCGTTCGCGATCCTTGCCTGAAAAATG < NC_002947/5262203‑5262056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |