New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5262156	56 (0.950)	6 (0.110)	6/240	NT	9.7%	coding (329/1488 nt)	PP_4638	methylenetetrahydrofolate reductase
	?	NC_002947	= 5262203	59 (1.060)					coding (376/1488 nt)	PP_4638	methylenetetrahydrofolate reductase

CATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCGGGGGCTGACTTCC  >  NC_002947/5262056‑5262347                                                                                                                                                    |                                                                                                                                                    cATTTTTCAGGCAAGGATCGCGAACGTCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATc                                                                                                                                                    <  7:39760‑M2/149‑2 (MQ=255) cATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATc                                                                                                                                                    >  7:145556‑M2/1‑148 (MQ=255)       tCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCACCCGGTGCGTTATCTGGAATcggtcg                                                                                                                                               >  3:143378‑M2/1‑142 (MQ=255)              aGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTg                                                                                                                                    >  1:287765/1‑149 (MQ=255)                 aTCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAg                                                                                                                                 >  2:126471/1‑149 (MQ=255)                  tCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAgg                                                                                                                                >  2:118570/1‑149 (MQ=255)                     cgAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTg                                                                                                                             >  1:223113/1‑149 (MQ=255)                          gCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGc                                                                                                                        >  3:348990/1‑149 (MQ=255)                               caccTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGc                                                                                                                   <  2:44737/149‑1 (MQ=255)                                     cTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCTGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGccc                                                                                                             >  6:253061/1‑149 (MQ=255)                                     cTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGccc                                                                                                             >  1:81604/1‑149 (MQ=255)                                       cGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAg                                                                                                                     <  1:318316/139‑1 (MQ=255)                                       cGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAg                                                                                                                     >  2:318316/1‑139 (MQ=255)                                          ccAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACt                                                                                                        >  5:212602/1‑149 (MQ=255)                                          ccAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACt                                                                                                        <  2:287765/149‑1 (MQ=255)                                            aaCTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTgg                                                                                                      <  6:212602/149‑1 (MQ=255)                                                  aGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGctgctg                                                                                                >  3:275169/1‑149 (MQ=255)                                                   gcgcATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCGCGCCAGGCCTGCCCGCACTGGCTGCTgg                                                                                               <  1:211888/149‑1 (MQ=255)                                                           aCGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTAGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTgcggcg                                                                                       >  1:55880/1‑149 (MQ=255)                                                            cgccgcCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATTGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGgcgc                                                                                      >  4:290907/1‑149 (MQ=255)                                                            cgccgcCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGgcgc                                                                                      >  4:257417/1‑149 (MQ=255)                                                                gccgGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGaa                                                                                  >  4:274392/1‑149 (MQ=255)                                                                         gACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTc                                                                           <  8:202315/147‑1 (MQ=255)                                                                              gCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTAc                                                                     >  2:33187/1‑148 (MQ=255)                                                                              ccTGTTACTGCTGAATGGCGACCGCCTGCACGGCCATGAACCTGGCCAGCTCCAGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCATGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTAc                                                                     >  6:234810/2‑148 (MQ=255)                                                                                  ttACTGCTGACTGGCGACCGCCTGCCTGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACg                                                                 <  5:253061/148‑1 (MQ=255)                                                                                  ttACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCAc                                                                  >  6:347461/1‑147 (MQ=255)                                                                                  ttACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACg                                                                 >  4:65725/1‑148 (MQ=255)                                                                                     ctgctgACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTgcggcg                                                                                       >  3:145384/1‑123 (MQ=255)                                                                                     ctgctgACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTgcggcg                                                                                       <  4:145384/123‑1 (MQ=255)                                                                                        ctgACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGgaag                                                           >  7:312027/1‑148 (MQ=255)                                                                                        ctgACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGgaag                                                           <  8:39760/148‑1 (MQ=255)                                                                                           tcTGTCGACCGCCTGCCCGGCCATGAACCTGGGCAGCGCCCGGTGCGTTTTCTGTAATCGGTCGC‑‑‑CGCCCTGCATGTTGCCCGCCAGGCCTGCCCGCACTTGCTGCTGGTTGGGGAGCTGAACCCGTTCAAGTTCCACGAGgaagaa                                                         <  5:234810/146‑1 (MQ=255)                                                                                           aCTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATcggtcgccagtcagcagtaacagctggtcgaggccggcggcgtccatgcgctgcagttgg                                                                                         >  6:100887‑M2/1‑58 (MQ=255)                                                                                           aCTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATcggtcgccagtcagcagtaacagctggtcgaggccggcggcgtccatgcgctgcagttgg                                                                                         <  5:100887‑M2/118‑61 (MQ=255)                                                                                           aCTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGgaagaa                                                         <  3:65725/147‑1 (MQ=255)                                                                                           aCTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAgg                                                       >  1:97910/1‑149 (MQ=255)                                                                                            cTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATcggtcgccagtcagcagtaacagctggtcgaggccggcggcgtccatgcgc                                                                                                  <  4:281918‑M2/108‑52 (MQ=255)                                                                                            cTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATcggtcgccagtcagcagtaacagctggtcgaggccggcggcgtccatgcgc                                                                                                  >  3:281918‑M2/1‑57 (MQ=255)                                                                                            cTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCg                                                                                                                         <  6:189319/82‑1 (MQ=255)                                                                                            cTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCAGCAGGTTGCCCg                                                                                                                         >  5:189319/1‑82 (MQ=255)                                                                                             tGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATcggtcgccagtcagcagtaacagctggtcgaggccggcggcgtccatgcgctgcagttgggcgagcaggtggtggcgttcgcgatccttgcct                                                        <  5:63751‑M2/149‑94 (MQ=255)                                                                                                   ccGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGccc                                               <  2:81604/149‑1 (MQ=255)                                                                                                      ccTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGt                                            <  8:312027/149‑1 (MQ=255)                                                                                                       cTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGa                                                                <  8:260686/128‑1 (MQ=255)                                                                                                       cTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGa                                                                >  7:260686/1‑128 (MQ=255)                                                                                                          cccGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTAc                                          <  1:147263/147‑1 (MQ=255)                                                                                                            cGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAAc                                                                                 >  5:143935/1‑106 (MQ=255)                                                                                                            cGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAAc                                                                                 <  6:143935/106‑1 (MQ=255)                                                                                                            cGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACg                                                                 >  6:103602/1‑122 (MQ=255)                                                                                                            cGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACg                                                                 <  5:103602/122‑1 (MQ=255)                                                                                                            cGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTc                                       >  2:120362/1‑148 (MQ=255)                                                                                                            cGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCa                                      <  3:257417/149‑1 (MQ=255)                                                                                                                 aTGATCCTGGCGAGCGCCCGGTGAGTTATCTGGAATCGCTCTCACACGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAg                                    <  1:126471/149‑1 (MQ=255)                                                                                                                 aTGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGcc                                 >  1:187206/1‑149 (MQ=255)                                                                                                                    aaCCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCga                               <  2:187206/148‑1 (MQ=255)                                                                                                                     aCCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAg                                                               <  8:70015/115‑1 (MQ=255)                                                                                                                      ccTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGAGCTGAACCCGTTCAAGTACAACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCgaga                             >  3:152945/1‑148 (MQ=255)                                                                                                                          gCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGaaaaat                        <  2:97910/149‑2 (MQ=255)                                                                                                                            cAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCt                      <  1:118570/149‑1 (MQ=255)                                                                                                                            cAGCGCCCGGTGCGTGATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCAGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCACGGCCGAGAAAACGCt                      >  6:360343/1‑149 (MQ=255)                                                                                                                             aGCGCCCGGTGCGTTATCTGGAATcggtcgccagtcagcagtaacagctggtcgaggccggcggcgtccatgcgctgcagttgggcgagcaggtggtggcgttcgcgatccttgcctgaaaaatgcggcagggcaggcaccgggttgct                        >  6:63751‑M2/1‑24 (MQ=255)                                                                                                                              gcgcCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTgg                    <  1:120362/149‑1 (MQ=255)                                                                                                                              gcgcCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTgg                    <  4:348990/149‑1 (MQ=255)                                                                                                                                       gCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCggggg           >  6:217848/1‑149 (MQ=255)                                                                                                                                        cGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCGGGGGc          >  4:331824/1‑149 (MQ=255)                                                                                                                                         gTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCGGGGGCt         <  4:275169/149‑1 (MQ=255)                                                                                                                                            aTCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCGGGGGCTGAc      >  2:186452/1‑149 (MQ=255)                                                                                                                                                ggAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGgcggcg                                                  <  6:286257/101‑1 (MQ=255)                                                                                                                                                ggAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGgcggcg                                                  >  5:286257/1‑101 (MQ=255)                                                                                                                                                ggAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCGGGGGCTGACTTcc  >  1:361151/1‑149 (MQ=255)                                                                                                                                                 gAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCGGGGGCTGACTTc   <  5:347461/147‑1 (MQ=255)                                                                                                                                                 gAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCGGGGGCTGACTTc   <  2:223113/147‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CATTTTTCAGGCAAGGATCGCGAACGCCACCACCTGCTCGCCCAACTGCAGCGCATGGACGCCGCCGGCCTCGACCAGCTGTTACTGCTGACTGGCGACCGCCTGCCCGGCCATGAACCTGGCCAGCGCCCGGTGCGTTATCTGGAATCGGTCGC‑‑‑CGCCCTGCAGGTTGCCCGCCAGGCCTGCCCGCACTGGCTGCTGGGTGCGGCGCTGAACCCGTTCAAGTACCACGAGGAAGAAGGCGGCGCCCAGTACTTCAAGGCCGAGAAAAAGCTGGCAGCGGGGGCTGACTTCC  >  NC_002947/5262056‑5262347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.