New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5464838 =	44 (0.740)	4 (0.070)	4/246	NT	6.8%	coding (280/651 nt)	lipB	octanoyltransferase
	?	NC_002947	5464939 =	67 (1.180)					coding (179/651 nt)	lipB	octanoyltransferase

CCCTGCGGTCTTCACCCAGGGGCAGGCCGGCAAGGCCGAGCACCTGCTGGTGCCGGGCGACATTCCGGTGGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5464989‑5464838 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGACCGCAGGGTGCTCGACCAGCCAGATTTCATCCTGGCTGTCCGGGCTGCGCTGCTCGGTAAAACGACGCATGGCCTCCAGCACCGGTTCATAG  >  NC_002947/5464939‑5465073                                                                                                                                                                                                                                                                                                 CCCTGCGGTCTTCACCCAGGGGCAGGCCGGCAAGGCCGAGCACCTGCTGGTGCCGGGCGACATTCCGGTGGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGCC                                                                                                                                            >  3:34530/1‑149  CCTGCGGTCTTCACCCAGGGGCAGGCCGGCAAGGCCGAGCACCTGCTGGTGCCGGGCGACATTCCGGTGGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGCCG                                                                                                                                           <  5:281750/149‑1                                      GAGCACCTGCTGGTGCCGGGCGACATTCCGGTGGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGC                                                                                                                                             <  5:218172/111‑1                                      GAGCACCTGCTGGTGCCGGGCGACATTCCGGTGGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGC                                                                                                                                             >  6:218172/1‑111                                                 GGTGCCGGGCGACATTCCGGTGGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGACC                                                                                            >  4:247201/1‑149                                                  GTGCCGGGCGACATTCCGGTGGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGACCG                                                                                           >  4:307854/1‑149                                                                      GGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGACCGCAGGGTGCTCGACCAGCCAG                                                                       <  3:307854/149‑1                                                                                                                                            GATGTGCGCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGACCGCAGGGTGCTCGACCAGCCAGATTTCATCCTGGCTGTCCGGGCTGCGCTGCTCGGTAAAACGACGCATGGCCTCCAGCACCGGTTCATAG  <  3:247201/148‑1                                                                                                                                                                                                                                                                                                 CCCTGCGGTCTTCACCCAGGGGCAGGCCGGCAAGGCCGAGCACCTGCTGGTGCCGGGCGACATTCCGGTGGTGCAGACCGACCGCGGCGGCCAGGTCACCTACCATGGCCCCGGGCAGCTGGTGGCCTACCTGCTGCTGGATGTGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5464989‑5464838 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGACCGCAGGGTGCTCGACCAGCCAGATTTCATCCTGGCTGTCCGGGCTGCGCTGCTCGGTAAAACGACGCATGGCCTCCAGCACCGGTTCATAG  >  NC_002947/5464939‑5465073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.