New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5464838 =	44 (0.740)	4 (0.070)	4/246	NT	6.8%	coding (280/651 nt)	lipB	octanoyltransferase
	?	NC_002947	5464939 =	67 (1.180)					coding (179/651 nt)	lipB	octanoyltransferase

ATTCGCAGGCCGAGGGAGGCGATTTTCGCTCCGTCGACATAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGAC  >  NC_002947/5464690‑5464982                                                                                                                                                     |                                                                                                                                                  aTTCGCAGGCCGAGGGAGGCGATTTTCGCTCCGTCGACATAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAg                                                                                                                                                   <  7:35195/149‑1 (MQ=255)              ctatgaaccggtgctggaggccatgcgtcgttttaccgagcagcgcagcccggacagccaggatgaaatctggctggtcgagcaccctgcggtcttcacccaggggcaggccggcaaggccgagcacctgctggtGCCGGCGCACATc                                                                                                                                       <  3:247201‑M1/13‑1 (MQ=255)                    cGATTTTCGCTCCGTCGACATAGACACCCGGGGCATCGGGCATGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑cagcagc                                                                                                                               <  5:327154/149‑1 (MQ=255)                        tttCGCTCCGTCGACATAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAgg                                                                                                                            >  1:25464/1‑148 (MQ=255)                        tttCGCTCCGTCGACATAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGCCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAgg                                                                                                                            >  1:1747/1‑148 (MQ=255)                              tCCGTCGACATAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAg                                                                                                                         <  8:1407/145‑1 (MQ=255)                              tCCGTCGACATAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAg                                                                                                                         >  7:1407/1‑145 (MQ=255)                                       aTAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGcc                                                                                                            >  8:49188/1‑149 (MQ=255)                                       aTAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGcc                                                                                                            >  5:242040/1‑149 (MQ=255)                                             acCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGca                                                                                                                                           <  5:6956/113‑1 (MQ=255)                                             acCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGca                                                                                                                                           >  6:6956/1‑113 (MQ=255)                                             acCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGc                                                                                                      <  2:25464/149‑1 (MQ=255)                                                 ggggCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATg                                                                                                  <  7:49188/149‑1 (MQ=255)                                                  ttcagtCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATg                                                                                                  <  3:5546/143‑1 (MQ=255)                                                             ttGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTg                                                                                      >  4:356436/1‑149 (MQ=255)                                                                  aGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGgccgc                                                                                 >  7:338954/1‑149 (MQ=255)                                                                  aGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGgccgc                                                                                 <  1:265272/149‑1 (MQ=255)                                                                  aGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGgccgc                                                                                 >  8:188998/1‑149 (MQ=255)                                                                        cTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGca                                                                                                                                           >  6:84055/1‑86 (MQ=255)                                                                        cTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGca                                                                                                                                           <  5:84055/86‑1 (MQ=255)                                                                          gAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGcggtcg                                                                         >  7:232345/1‑149 (MQ=255)                                                                           aaCAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGcggtcg                                                                         <  6:242040/148‑1 (MQ=255)                                                                                   ctggctggtcgagcaccctgcggtcttcacccaggggcaggccggcaaggccgagcacctgctggtGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGcacc                                                                <  3:307854‑M1/83‑1 (MQ=255)                                                                                       ggCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGcaccac                                                              >  3:176570/1‑147 (MQ=255)                                                                                       ggCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGcaccac                                                              <  4:176570/147‑1 (MQ=255)                                                                                          gAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGaa                                                         <  8:217411/149‑1 (MQ=255)                                                                                            gCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATCTAAGCAGCAGGTAGGCCACCAGCTGCCCCGAGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCCCCACCGGAAt                                                        >  1:307316/1‑149 (MQ=255)                                                                                             cAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGt                                                      >  5:272214/1‑149 (MQ=255)                                                                                             cAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGt                                                      <  2:1747/149‑1 (MQ=255)                                                                                                gTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCAACCAGCTGCCCGGGTCCATGGTAGGTGACCTGTCCGCCGCGGTCTGTCTTCACCAGCGGAATGTCGc                                                   >  2:255459/1‑149 (MQ=255)                                                                                                   gATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGt                                                      <  1:350947/143‑1 (MQ=255)                                                                                                   gATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGt                                                      >  2:350947/1‑143 (MQ=255)                                                                                                   gATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGccc                                                 <  3:356436/148‑1 (MQ=255)                                                                                                    aTGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTg                                                                                      <  5:33508/110‑1 (MQ=255)                                                                                                    aTGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTg                                                                                      >  6:33508/1‑110 (MQ=255)                                                                                                       cggtcttcacccaggggcaggccggcaaggccgagcacctgctggtGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCAc                                            >  4:307854‑M1/47‑149 (MQ=255)                                                                                                        ggtcttcacccaggggcaggccggcaaggccgagcacctgctggtGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCAcc                                           >  4:247201‑M1/46‑149 (MQ=255)                                                                                                           ccAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAg                                                                                              <  8:226325/95‑1 (MQ=255)                                                                                                             aGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACcagcag                                      >  6:375249/1‑149 (MQ=255)                                                                                                             aGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACcagcag                                      <  3:337328/149‑1 (MQ=255)                                                                                                                  gATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCt                                 >  4:34530/1‑149 (MQ=255)                                                                                                                    tACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCg                               <  7:188998/149‑1 (MQ=255)                                                                                                                              cAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCgg                     >  6:91711/1‑149 (MQ=255)                                                                                                                                 cTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGGAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGGGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCt                  <  6:272214/149‑1 (MQ=255)                                                                                                                                    acgcacgcCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGcc               >  6:145407/1‑149 (MQ=255)                                                                                                                                        acgcCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTg           >  3:190973/1‑149 (MQ=255)                                                                                                                                         cgcCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTgg          <  4:190973/149‑1 (MQ=255)                                                                                                                                            cAAAGCCCAGCAGGCGCACATC‑CAGCAGCAGGTAGGCCACAAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTgggc        >  1:64432/1‑147 (MQ=255)                                                                                                                                             aaaGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGa      <  8:338954/149‑1 (MQ=255)                                                                                                                                                 cccAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAACAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGAc  >  7:211201/1‑149 (MQ=255)                                                                                                                                                  ccAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCt                  <  7:194857/132‑1 (MQ=255)                                                                                                                                                  ccAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCt                  >  8:194857/1‑132 (MQ=255)                                                                                                                                                   cAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTggg         <  3:121987/140‑1 (MQ=255)                                                                                                                                                   cAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTggg         >  4:121987/1‑140 (MQ=255)                                                                                                                                                     |                                                                                                                                                  ATTCGCAGGCCGAGGGAGGCGATTTTCGCTCCGTCGACATAGACACCCGGGGCATCGGGCTTGGCAGACGCCTGAACAGCATAGCTGGCGAGCAGGTCGATGAGGGCCAGCTCGATACGGCTGACCAGCTCACGCACGCCAAAGCCCAGCCGGCGCACATC‑CAGCAGCAGGTAGGCCACCAGCTGCCCGGGGCCATGGTAGGTGACCTGGCCGCCGCGGTCGGTCTGCACCACCGGAATGTCGCCCGGCACCAGCAGGTGCTCGGCCTTGCCGGCCTGCCCCTGGGTGAAGAC  >  NC_002947/5464690‑5464982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.