| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5543748 = | 51 (0.860) | 3 (0.050) | 3/240 | NT | 5.2% | coding (395/864 nt) | PP_4875 | membrane protein |
| ? | NC_002947 | 5543800 = | 61 (1.100) | coding (343/864 nt) | PP_4875 | membrane protein | |||||
GCCGCCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5543902‑5543748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgaaggTTTGCGCCAGCGCCAGATCAAGCAC‑GAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATGGGA > NC_002947/5543800‑5543942 GCCGCCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAAT > 8:140990/1‑149GCCGCCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAAT < 2:380455/149‑1 CCGCCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATC < 8:335590/149‑1 GCCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAAT < 3:282132/146‑1 GCCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAAT > 4:282132/1‑146 CCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAA < 7:164634/149‑1 CCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAA < 6:302661/149‑1 CATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAAG < 5:152978/149‑1 ATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAAGG < 6:18372/149‑1 ATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAAGG < 7:140990/149‑1 CGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAA > 1:125407/1‑100 CGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAA < 2:125407/100‑1 CCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCAAGCCGAAAATCGAAGGTTTGCGCCAGCGCCAGATCAAGCAC‑GAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCAC > 8:222107/1‑142 CCTTCGATGTGCTGGCCAAGGCGTGTGCCGAAGCCACGCCGAAAATCGAAGGTTTGCGCCAGCGCCAGATCAAGCAC‑GAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCAC < 7:222107/142‑1 CTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAAGGTTTGCGCCAGCGCCAGATCAAGCAC‑GAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATG > 6:35569/1‑149 CGAAGGTTTGCGCCAGCGCCAGATCAAGCAC‑GAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATGGGA > 2:187679/1‑149 GAAGGTTTGCGCCAGCGCCAGATCAAGCACGGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATGGGA > 1:39309/1‑149 GCCGCCATGTTGCGTGCCGAGCACCCCTGGAGCCGGGTGTTGCTCGCCAGTGCCGTGTTCGCCGTGGCTTTCAGCCTCGTGCTTGATCTGGCGCTGGCGCAAACCTTCGATGTGCTGGCCAAGGCGTTTGCCGAAGCCATGCCGAAAATCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5543902‑5543748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgaaggTTTGCGCCAGCGCCAGATCAAGCAC‑GAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATGGGA > NC_002947/5543800‑5543942 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |