| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5543748 = | 51 (0.860) | 3 (0.050) | 3/240 | NT | 5.2% | coding (395/864 nt) | PP_4875 | membrane protein |
| ? | NC_002947 | 5543800 = | 61 (1.100) | coding (343/864 nt) | PP_4875 | membrane protein | |||||
TCGCGACCGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAT > NC_002947/5543604‑5543896 | tcccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctccgtgcttgatctggcgctggcgcaaaCCTTc > 1:39309‑M1/145‑149 (MQ=255)tCGCGACCGAAGCCTCCAGGGTTGTACAACGCTGCATGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACAGTCACTGCTGTGGAAGCGACAAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTc > 4:178540/1‑149 (MQ=255) tcccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCg > 2:187679‑M1/144‑149 (MQ=255) catggTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATgg < 7:235512/144‑1 (MQ=255) ggtttGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTc < 1:58817/146‑1 (MQ=255) gggTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTc < 3:316761/149‑1 (MQ=255) gTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCgg < 1:358394/149‑1 (MQ=255) cGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCt > 7:70608/1‑149 (MQ=255) gCTTCCTGCCAATAGAGAGCCAGCATCAACGCCAGCACACTTAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCtt < 1:331438/149‑1 (MQ=255) cctgccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTgg < 4:179876/147‑1 (MQ=255) tgccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAg > 7:338227/1‑149 (MQ=255) ccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAg < 7:26550/147‑1 (MQ=255) gcgcCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAg < 8:70608/149‑1 (MQ=255) catgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAg > 6:35569‑M1/99‑149 (MQ=255) gCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgc < 4:57109/149‑1 (MQ=255) gtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGATTTTCGGCTTGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAgg > 8:222107‑M1/91‑142 (MQ=255) gtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGATTTTCGGCGTGGCTTCGGCACACGCCTTGGCCAGCACATCGAAgg < 7:222107‑M1/52‑1 (MQ=255) tCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcgc > 5:89968/1‑148 (MQ=255) tCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcgc > 6:251225/1‑148 (MQ=255) cGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcgccagcg > 6:87104/1‑149 (MQ=255) acTGAACAATTGCACCGTCACTGCTGTGGAAGCGACGAGCACTGGGCGGATCAGCTCACCGGTTAGCACCGGTTGCCCTTCGATTTTCGGCTTGGCTTCGGCAATCGCCTTGGCCAGCACATCGAAGGTTTGCGCGAGCGCCAGATCaa < 4:109714/149‑1 (MQ=255) tGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAg > 4:72916/1‑148 (MQ=255) aaCAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCAc < 6:340143/149‑1 (MQ=255) aaTTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAg > 1:43604/1‑149 (MQ=255) aTTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAgg < 6:89968/149‑1 (MQ=255) aCCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGa > 6:344343/1‑148 (MQ=255) gTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGc > 4:6698/1‑149 (MQ=255) aCTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCAc > 4:74723/1‑149 (MQ=255) ctgctgTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACg < 8:338227/149‑1 (MQ=255) ctgTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGc > 5:245398/1‑148 (MQ=255) gAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAacac > 6:197851/1‑149 (MQ=255) gAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAacac > 5:369157/1‑149 (MQ=255) gAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAaca < 5:344343/148‑1 (MQ=255) aGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACgg < 3:178540/149‑1 (MQ=255) gCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACgg > 3:239741/1‑148 (MQ=255) aCCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACt > 6:319574/1‑149 (MQ=255) ccAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTTCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTg < 6:251253/149‑1 (MQ=255) ccAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTg < 5:87104/149‑1 (MQ=255) aGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGc < 5:319574/149‑1 (MQ=255) aGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGc > 4:119172/1‑149 (MQ=255) gCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGc > 6:45802/1‑148 (MQ=255) cacaGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGa < 3:74723/149‑1 (MQ=255) caGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGc < 2:43604/149‑1 (MQ=255) aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGc > 7:266922/1‑148 (MQ=255) aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCAGAAAGCCACGGCGAACACGGCACTGGCGAGc > 3:205959/1‑148 (MQ=255) gggCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCaa < 1:43679/149‑1 (MQ=255) ggCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGc < 7:317184/146‑1 (MQ=255) ggCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGc > 8:317184/1‑146 (MQ=255) ggATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACgg < 3:77982/132‑1 (MQ=255) ggATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACgg > 4:77982/1‑132 (MQ=255) gATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACAccc < 4:239741/149‑1 (MQ=255) gCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTc > 5:304112/1‑149 (MQ=255) aCCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAgg > 1:148065/1‑149 (MQ=255) ccGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAggg < 3:72916/149‑1 (MQ=255) ccGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCCGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAggg < 4:205959/149‑1 (MQ=255) cGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAgg > 6:209054/1‑147 (MQ=255) cGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAgg < 5:209054/147‑1 (MQ=255) ttGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGc > 2:112332/1‑148 (MQ=255) CCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAt < 7:140990‑M1/149‑1 (MQ=255) CCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAt < 6:18372‑M1/149‑1 (MQ=255) | TCGCGACCGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAT > NC_002947/5543604‑5543896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |